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Does Oxygen Feature Chalcogen Bonding?
1Department of Chemical System Engineering, School of Engineering, The University of Tokyo 7-3-1, Tokyo 113-8656, Japan. prv.aist@gmail.com.
Molecules (Basel, Switzerland)
|September 5, 2019
Summary
Oxygen atoms can form chalcogen bonds, challenging existing scientific views. This study reveals that a positive σ-hole on oxygen enables this interaction, previously thought unlikely.
Area of Science:
- Computational chemistry
- Quantum chemistry
- Molecular interactions
Background:
- A σ-hole is an electron-deficient region on an atom involved in a covalent bond.
- Chalcogen bonding typically involves heavier elements in Group 16.
- The role of oxygen in chalcogen bonding is not well-established.
Purpose of the Study:
- To investigate the existence and nature of σ-holes on covalently bound oxygen atoms.
- To explore the potential of oxygen to form chalcogen bonds.
- To challenge the prevailing view that oxygen does not participate in chalcogen bonding.
Main Methods:
- Utilizing second-order Møller-Plesset perturbation theory (MP2) for electronic structure calculations.
- Employing Dunning's all-electron correlation consistent basis set (aug-cc-pVTZ).
- Analyzing 21 prototypical monomer molecules and exemplar 1:1 binary complexes with Lewis bases.
Main Results:
- Covalently bound oxygen atoms can exhibit positive or negative σ-holes.
- Oxygen-centered positive σ-holes facilitate chalcogen bonding interactions with Lewis bases.
- Weakly bound interactions were observed in binary complexes, supporting oxygen's role in chalcogen bonding.
Conclusions:
- Oxygen atoms can form chalcogen bonds, contrary to common assumptions.
- The presence of a positive σ-hole on oxygen is key to this interaction.
- This finding expands the scope of known chalcogen bonding systems.
Keywords:
NBOQTAIMand RDG analysesbonding characterizationsfirst-principles studyoxygen-centered chalcogen bondingsigma-hole intermolecular interactionsMore Related Videos
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