Correction to: SimpleITK Image-Analysis Notebooks: a Collaborative Environment for Education and Reproducible Research

Organic Lab Notebook Keeping
Record keeping is a vital skill in science and organic chemistry labs. Without proper notes, descriptions, quantities, or observations, an experiment conducted in the lab cannot be replicated or reproduced. Therefore, keeping an accurate and up-to-date notebook is necessary to achieve reproducibility in science. A laboratory notebook is a powerful tool in both academic and industrial settings. It becomes especially important when a discovery is patented and...

Source: Lara Al Hariri and Ahmed Basabrain at the University of Massachusetts Amherst, MA, USA

Time-lapse microscopy allows the visualization of developmental processes. Growth or drift of samples during image acquisition reduces the ability to accurately follow and measure cell movements during development. We describe the use of open source image processing software to correct for three dimensional sample drift over...

Here, we present a protocol for the simulation and monitoring of a scaled semi-automated assembly process, through the collaboration of a collaborative robot and verification via a computer vision system for quality...

Single molecule RNA fluorescence in situ hybridization (smFISH) is a method to accurately quantify levels and localization of specific RNAs at the single cell level. Here, we report our validated lab protocols for wet-bench processing, imaging and image analysis for single cell quantification of specific...

Here we show key steps in the process of creating high-quality, resin-embedded arthropods for educational instruction and...