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Updated: Jan 20, 2026

Brain Banking: Making the Most of your Research Specimens
Published on: July 24, 2009
Perfusion fixation in brain banking: a systematic review.
Whitney C McFadden1, Hadley Walsh2, Felix Richter3
1Department of Psychiatry, Icahn School of Medicine at Mount Sinai, One Gustave L. Levy Place, New York, NY, 10029, USA.
Perfusion fixation of human brain tissue offers equal or better histology quality than immersion fixation. This method is crucial for advancing spatial biomolecular profiling and connectomics research in postmortem human brains.
Area of Science:
- Neuroscience
- Histology
- Biomolecular Profiling
Background:
- Perfusion fixation is standard in animals for brain studies, but immersion fixation is common for human autopsy tissue.
- Immersion fixation limits tissue architecture preservation, hindering advanced analyses like connectomics.
- Challenges and benefits of human brain perfusion fixation are not well-defined.
Purpose of the Study:
- To systematically review and synthesize existing literature on perfusion fixation of human brain tissue.
- To define the methods used in human brain perfusion fixation and compare outcomes with immersion fixation.
- To assess the impact of perfusion fixation on histology quality for postmortem human brain samples.
Main Methods:
- Conducted a systematic literature search across four databases.
- Screened abstracts and full-text publications for studies on human brain perfusion fixation.
- Extracted data on perfusion fixation methods and comparative outcomes with immersion fixation.
Main Results:
- Identified 35 studies involving 558 human brains and diverse perfusion fixation techniques.
- Found moderate evidence that perfusion fixation yields equal or superior histology quality compared to immersion fixation.
- Perfusion fixation can preserve large tissue volumes in equal or less time than immersion fixation.
Conclusions:
- Perfusion fixation is a viable and effective method for preserving human brain tissue for advanced research.
- This review provides a resource for researchers implementing perfusion fixation in human or large animal brains.
- Further research is needed to compare in situ vs. ex situ perfusion and optimize fixation protocols for different donor types.
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