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Updated: Jan 20, 2026

Procedure for Adaptive Laboratory Evolution of Microorganisms Using a Chemostat
Published on: September 20, 2016
(In)exhaustible Suppliers for Evolution? Epistatic Selection Tunes the Adaptive Potential of Nongenetic Inheritance
Abstract:
Nongenetic inheritance media-from methyl-accepting cytosines to culture-tend to mutate more frequently than DNA sequences. Whether this makes them inexhaustible suppliers for adaptive evolution will depend on the effect of nongenetic mutations (hereafter, epimutations) on fitness-related traits. Here we investigate how these effects might themselves evolve, specifically whether natural selection may set boundaries to the adaptive potential of nongenetic inheritance media because of their higher mutability. In our model, the genetic and epigenetic contributions to a nonneutral phenotype are controlled by an epistatic modifier locus, which evolves under the combined effects of drift and selection. We show that a pure genetic control evolves when the environment is stable-provided that the population is large-such that the phenotype becomes robust to frequent epimutations. When the environment fluctuates, however, selection on the modifier locus also fluctuates and can overall produce a large nongenetic contribution to the phenotype, especially when the epimutation rate matches the rate of environmental variation. We further show that selection on the modifier locus is generally insensitive to recombination, meaning it is mostly direct, that is, not relying on subsequent effects in future generations. These results suggest that unstable inheritance media might significantly contribute to fitness variation of traits subject to highly variable selective pressures but little to traits responding to scarcely variable aspects of the environment. More generally, our study demonstrates that the rate of mutation and the adaptive potential of any inheritance media should not be seen as independent properties.
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