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Analyzing Melts and Fluids from Ab Initio Molecular Dynamics Simulations with the UMD Package
Published on: September 17, 2021
Assessment of dynamical properties of mercaptopurine on the peptide-based metal-organic framework in response to
Mahnaz Shahabi1, Heidar Raissi2
1Chemistry Department, University of Birjand, Birjand, Iran. mahnazshahabi@birjand.ac.ir.
Abstract:
In this work, the effect of the external electric field (EF) on the drug delivery performance of peptide-based metal-organic framework (MPF) for 6-mercaptopurine (6-MP) drug is investigated by means of the molecular dynamics (MD) simulations. It is found that the strength interaction of drug molecule with MPF is decreased under the influence of the electric field. In other words, the adsorbed drug molecules have more tendencies for the interaction with the porous nanostructure in the absence of EF. According to the radial distribution function (RDF) patterns, the probability of finding drug molecules in terms of the intermolecular distance with respect to the MPF surface is lowest during the high field strength. As the EF strength increases, the spread of drug molecules around MPF results in high dynamics movement and further more diffusion coefficient of drug molecule in the simulation system. This result emphasizes the weak intermolecular interaction of drug molecules with MPF with the application of EF. Assessment of dynamical properties of 6-mercaptopurine in the presence of EF with various strengths reveals that the applied electric field can act as a trigger on liberation behavior of drug from the porous nanostructure.
Insights
External electric fields weaken drug interactions with peptide-based metal-organic frameworks (MPF). This electric field application enhances drug molecule mobility and release from MPF, showing potential for controlled drug delivery.
Area of Science:
- Materials Science
- Computational Chemistry
- Nanotechnology
Background:
- Peptide-based metal-organic frameworks (MPFs) are promising for drug delivery.
- Controlling drug release from nanocarriers is crucial for therapeutic efficacy.
- External stimuli, like electric fields, offer tunable control over drug delivery systems.
Purpose of the Study:
- To investigate the effect of external electric fields (EF) on the drug delivery performance of MPFs.
- To understand the interaction dynamics between 6-mercaptopurine (6-MP) and MPF under varying electric field strengths.
- To evaluate the potential of EF as a trigger for drug liberation from MPF nanostructures.
Main Methods:
- Molecular dynamics (MD) simulations were employed to study the system.
- Radial distribution function (RDF) patterns were analyzed to assess drug-MPF interactions.
- Dynamical properties, including diffusion coefficients, were evaluated at different EF strengths.
Main Results:
- External electric fields significantly decrease the interaction strength between 6-mercaptopurine and MPF.
- Higher EF strengths lead to weaker drug-MPF interactions and increased drug molecule mobility.
- The diffusion coefficient of the drug molecule increases with increasing EF strength, indicating enhanced movement.
Conclusions:
- The applied electric field acts as a trigger, facilitating the liberation of 6-mercaptopurine from the porous MPF nanostructure.
- EF can modulate drug-carrier interactions, offering a mechanism for controlled drug release.
- This study highlights the potential of electric fields for fine-tuning drug delivery systems based on MPFs.
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