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Updated: Jan 19, 2026

Identification of OTX1 and OTX2 As Two Possible Molecular Markers for Sinonasal Carcinomas and Olfactory Neuroblastomas
Published on: February 28, 2019
Morpho-Molecular Assessment Indicates New Prognostic Aspects and Personalized Therapeutic Options in Sinonasal
Sandra N Freiberger1,2, Grégoire B Morand3,4, Patrick Turko5,6
1Department of Pathology and Molecular Pathology, University Hospital Zurich, 8091 Zurich, Switzerland. sandra.freiberger@usz.ch.
Abstract:
Sinonasal melanoma is a rare subtype of melanoma and little is known about its molecular fingerprint. Systemic treatment options are limited, as targetable BRAF mutations are rare compared to cutaneous melanoma. Currently, metastatic sinonasal melanoma is being treated according to the guidelines of cutaneous melanoma. In this study, we investigated the molecular profile of 19 primary sinonasal melanomas, using a novel customized melanoma-specific next generation sequencing (NGS) panel (MelArray) of 190 genes. Results were correlated to histological and clinical features to further characterize this rare, aggressive type of melanoma and screen for prognostic markers and possible treatment options. Molecular profiles encompassed predominantly mutations in NRAS (25%), whereas KIT or BRAF p.V600 mutations were not detected. Tumor mutational burden was overall low. High level of copy number variations (CNVs) were associated with alterations in DNA-repair genes and shorter distant metastasis-free survival (p = 0.005). Monomorphic (vs. pleomorphic) morphology was found to be significantly associated with worse disease-specific survival (p < 0.001), however no correlation between morphology and molecular aberrations was found. A variety of alterations in different pathways were detected, justifying molecular testing and opening potential personalized treatment options in current study or compassionate use settings.
Insights
Sinonasal melanoma, a rare cancer, shows predominantly NRAS mutations, not BRAF. High copy number variations correlate with shorter survival, suggesting personalized treatment avenues.
Area of Science:
- Oncology
- Genetics
- Pathology
Background:
- Sinonasal melanoma is a rare malignancy with limited understanding of its molecular characteristics.
- Current systemic treatments for metastatic sinonasal melanoma follow guidelines for cutaneous melanoma.
- Targetable BRAF mutations are infrequent in sinonasal melanoma compared to cutaneous melanoma.
Purpose of the Study:
- To investigate the molecular profile of primary sinonasal melanomas.
- To correlate molecular findings with histological and clinical features.
- To identify potential prognostic markers and personalized treatment strategies.
Main Methods:
- Analysis of 19 primary sinonasal melanomas.
- Utilized a custom melanoma-specific next-generation sequencing (NGS) panel (MelArray) targeting 190 genes.
- Correlated molecular data with histological and clinical features.
Main Results:
- Predominant mutations were observed in NRAS (25%); KIT or BRAF p.V600 mutations were not detected.
- Tumor mutational burden was generally low.
- High copy number variations (CNVs) were linked to DNA-repair gene alterations and reduced distant metastasis-free survival (p = 0.005).
- Monomorphic morphology was significantly associated with worse disease-specific survival (p < 0.001), independent of molecular aberrations.
Conclusions:
- Sinonasal melanoma exhibits a distinct molecular profile, primarily featuring NRAS mutations.
- High CNVs and specific morphological features are associated with poorer survival outcomes.
- Molecular profiling is crucial for identifying potential therapeutic targets and guiding personalized treatment approaches for sinonasal melanoma.
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