Related Experiment Video
Updated: Jan 19, 2026
The Nucleosome Core Particle: Histone Octamer, Histone Fold
Self-assembly of core-corona particles confined in a circular box
Erik R Fonseca1, Carlos I Mendoza1
1Instituto de Investigaciones en Materiales, Universidad Nacional Autónoma de México, Apdo. Postal 70-360, 04510 CdMx, Mexico.
Abstract:
Using Monte Carlo simulations, we study the assembly of colloidal particles interacting via isotropic core-corona potentials in two dimensions and confined in a circular box. We explore the structural variety at low temperatures as function of the number of particles (N) and the size of the confining box and find a rich variety of patterns that are not observed in unconfined flat space. For a small number of particles [Formula: see text], we identify the zero-temperature minimal energy configurations at a given box size. When the number of particles is large ([Formula: see text]), we distinguish different regimes that appear in route towards close packing configurations as the box size decreases. These regimes are characterized by the increase in the number of branching points and their coordination number. Interestingly, we obtain anisotropic open structures with unexpected variety of rotational symmetries that can be controlled by changing the model parameters, and some of the structures have chirality, in spite of the isotropy of the interactions and of the confining box. For arbitrary temperatures, we employ Monte Carlo integration to obtain the average energy and the configurational entropy of the system, which are then used to construct a phase diagram as function of temperature and box radius. Our findings show that confined core-corona particles can be a suitable system to engineer particles with highly complex internal structure that may serve as building blocks in hierarchical assembly.
Related Concept Videos
The Nucleosome Core Particle
The paradox
Nucleosomes, paradoxically, perform two opposite functions simultaneously. On the one hand, their main responsibility is to protect the delicate DNA strands from physical damage and help achieve a higher compaction ratio. While on the other hand, they must allow polymerase enzymes to access DNA...
The Nucleosome Core Particle
Nucleosomes, paradoxically, perform two opposite functions simultaneously. On the one hand, their primary aim is to protect the delicate DNA strands from physical damage and help achieve a higher compaction ratio. On the other hand, they must allow polymerase enzymes to access histone-bound DNA during...
12:33Origami Inspired Self-assembly of Patterned and Reconfigurable Particles
09:47Facile Preparation of Internally Self-assembled Lipid Particles Stabilized by Carbon Nanotubes
05:58Detecting and Characterizing Protein Self-Assembly In Vivo by Flow Cytometry
10:40Assembly of Nucleosomal Arrays from Recombinant Core Histones and Nucleosome Positioning DNA
