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Updated: Jan 19, 2026

Discovery of Driver Genes in Colorectal HT29-derived Cancer Stem-Like Tumorspheres
Published on: July 22, 2020
Antiproliferative Effects of Short-chain Fatty Acids on Human Colorectal Cancer Cells via Gene Expression Inhibition
1Department of Intestinal Bioscience and Medicine, School of Medicine, Fukushima Medical University, Fukushima, Japan t-ohara@fmu.ac.jp.
Background/Aim:
Short-chain fatty acids (SCFAs) inhibit human colorectal cancer cell growth and tumorigenicity. We investigated the mechanism of the anti-proliferative effects of SCFAs on human colorectal cancer cells by examining their effects on gene expression.
Materials And Methods:
The DLD-1 cell line was cultured with different SCFAs. Gene groups whose expression levels decreased to <50% or increased >50% compared to untreated cells and the signalling pathways responsible for DLD-1 cell growth inhibition were identified and analyzed.
Results:
Genes whose expression levels decreased to ≤50% (791 genes) showed remarkable changes in gene function compared to genes whose expression levels increased ≥50%. These genes encode proteins involved in DNA replication and cell cycle/proliferation that contribute to major pathways responsible for suppression of colorectal carcinogenesis pathways.
Conclusion:
SCFAs inhibited the expression of genes encoding proteins involved in DNA replication and cell cycle/proliferation of human colorectal cancer cells and exerted antiproliferative activity via different pathways.
Insights
Short-chain fatty acids (SCFAs) reduce colorectal cancer cell proliferation by downregulating genes essential for DNA replication and cell cycle progression. This mechanism contributes to their anti-tumorigenic effects.
Area of Science:
- Oncology
- Molecular Biology
- Genetics
Background:
- Short-chain fatty acids (SCFAs) are known to inhibit colorectal cancer cell growth and tumorigenicity.
- Understanding the molecular mechanisms behind SCFA anti-proliferative effects is crucial for developing novel cancer therapies.
Purpose of the Study:
- To investigate the gene expression changes induced by SCFAs in human colorectal cancer cells.
- To elucidate the pathways through which SCFAs exert their anti-proliferative effects.
Main Methods:
- Human colorectal cancer DLD-1 cells were cultured with various SCFAs.
- Gene expression levels were analyzed to identify significant changes (decrease <50% or increase >50%) compared to control cells.
- Signaling pathways involved in cell growth inhibition were identified.
Main Results:
- A significant decrease in the expression of 791 genes (≤50% of control) was observed.
- Downregulated genes were primarily involved in DNA replication and cell cycle/proliferation.
- These changes indicate SCFA-mediated suppression of key colorectal carcinogenesis pathways.
Conclusions:
- SCFAs inhibit colorectal cancer cell proliferation by downregulating genes critical for DNA replication and cell cycle progression.
- The anti-proliferative activity of SCFAs is mediated through distinct molecular pathways.
- These findings highlight SCFAs as potential therapeutic agents for colorectal cancer.
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