Illuminating the virus life cycle with single-molecule FRET imaging

Maolin Lu1, Xiaochu Ma1, Walther Mothes1

  • 1Department of Microbial Pathogenesis, Yale University School of Medicine, New Haven, CT, United States.

Advances in Virus Research
|September 17, 2019
PubMed

Related Concept Videos

Studying DNA Looping by Single-Molecule FRET11:27

Studying DNA Looping by Single-Molecule FRET

This study presents a detailed experimental procedure to measure looping dynamics of double-stranded DNA using single-molecule Fluorescence Resonance Energy Transfer (FRET). The protocol also describes how to extract the looping probability density called the J...
15.9K
Automated Two-dimensional Spatiotemporal Analysis of Mobile Single-molecule FRET Probes08:26

Automated Two-dimensional Spatiotemporal Analysis of Mobile Single-molecule FRET Probes

This article presents a method for spatiotemporal analysis of mobile, single-molecule Förster resonance energy transfer (smFRET)-based probes using widefield fluorescence microscopy. The newly developed software toolkit allows the determination of smFRET time traces of moving probes, including the correct FRET efficiency and the molecular positions, as functions of...
2.9K
Single-Molecule FRET Imaging for Observing the Conformational Dynamics of Dynamin-Like GTPase Atlastin10:19

Single-Molecule FRET Imaging for Observing the Conformational Dynamics of Dynamin-Like GTPase Atlastin

The functions of dynamin superfamily proteins depend on conformational changes coupled with GTP hydrolysis. A system is described using the single-molecule FRET (smFRET) technique to monitor the conformational dynamics of dynamin-like GTPase atlastin in different nucleotide-loading...
1.0K
Using Three-color Single-molecule FRET to Study the Correlation of Protein Interactions11:22

Using Three-color Single-molecule FRET to Study the Correlation of Protein Interactions

Here, we present a protocol to obtain three-color smFRET data and its analysis with a 3D ensemble Hidden Markov Model. With this approach, scientists can extract kinetic information from complex protein systems, including cooperativity or correlated...
10.6K
Visualizing the Conformational Dynamics of Membrane Receptors Using Single-Molecule FRET10:59

Visualizing the Conformational Dynamics of Membrane Receptors Using Single-Molecule FRET

This study presents a detailed procedure to perform single-molecule fluorescence resonance energy transfer (smFRET) experiments on G protein-coupled receptors (GPCRs) using site-specific labeling via unnatural amino acid (UAA) incorporation. The protocol provides a step-by-step guide for smFRET sample preparation, experiments, and data...
3.8K
Structural Information from Single-molecule FRET Experiments Using the Fast Nano-positioning System12:30

Structural Information from Single-molecule FRET Experiments Using the Fast Nano-positioning System

We present the setup and experimental procedure to obtain smFRET data from large donor-acceptor networks with a TIRF microscope. The step-by-step analysis of these measurements with the Bayesian inference software Fast-NPS yields high-resolved structural information via the application of adapted dye...
12.6K