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Deep vessel segmentation by learning graphical connectivity.

Seung Yeon Shin1, Soochahn Lee2, Il Dong Yun3

  • 1Department of Electrical and Computer Engineering, Automation and Systems Research Institute, Seoul National University, 1 Gwanak-ro, Gwanak-gu, Seoul, 08826, South Korea.

Medical Image Analysis
|September 20, 2019
PubMed
Summary
This summary is machine-generated.

This study introduces a novel deep learning system combining Convolutional Neural Networks (CNNs) and Graph Neural Networks (GNNs) for accurate vessel segmentation. The integrated approach enhances segmentation by leveraging both local image features and global vessel structures.

Keywords:
Convolutional neural networkGraph neural networkVessel graph networkVessel segmentation

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Area of Science:

  • Medical Imaging Analysis
  • Deep Learning
  • Computer Vision

Background:

  • Current Convolutional Neural Network (CNN) methods for vessel segmentation primarily rely on local image appearances.
  • These methods often overlook the inherent graphical structure and neighborhood relationships within vessel shapes, potentially limiting segmentation accuracy.
  • Improving vessel segmentation is crucial for various medical diagnostic and analytical applications.

Purpose of the Study:

  • To develop a novel deep learning system for enhanced vessel segmentation.
  • To integrate Graph Neural Networks (GNNs) with CNNs to exploit both local appearances and global vessel structures.
  • To validate the proposed method's performance against state-of-the-art techniques on diverse medical imaging datasets.

Main Methods:

  • A unified deep learning architecture combining CNNs for local feature extraction and GNNs for modeling global vessel structures.
  • Extensive comparative evaluations were performed on four retinal image datasets and one coronary artery X-ray angiography dataset.
  • Statistical significance was assessed using paired t-tests to compare performance metrics.

Main Results:

  • The proposed CNN-GNN hybrid method demonstrated superior or comparable performance to existing state-of-the-art methods.
  • Performance was measured using key metrics such as average precision and area under the receiver operating characteristic curve.
  • Ablation studies confirmed the effectiveness of the chosen algorithmic details and hyperparameter settings.

Conclusions:

  • The novel deep learning system effectively integrates local and global information for improved vessel segmentation accuracy.
  • The proposed architecture is versatile and can enhance the performance of various CNN-based vessel segmentation techniques.
  • This approach offers a promising advancement for medical image analysis, particularly in cardiovascular and retinal imaging.