Xist RNA in action: Past, present, and future
Agnese Loda1, Edith Heard1,2
1Directors' research, European Molecular Biology Laboratory (EMBL), Heidelberg, Germany.
Plos Genetics
|September 20, 2019
Summary
X-chromosome inactivation (XCI) ensures proper gene dosage in female mammals. The X-inactive-specific transcript (Xist) long noncoding RNA orchestrates epigenetic changes for XCI, crucial for embryonic development.
Area of Science:
- Epigenetics
- Molecular Biology
- Developmental Biology
Background:
- Dosage compensation between XX females and XY males in mammals relies on X-chromosome inactivation (XCI).
- The X-inactive-specific transcript (Xist) long noncoding RNA is essential for initiating XCI.
- Xist RNA spreads across the X chromosome, triggering gene silencing and chromatin remodeling.
Purpose of the Study:
- To review the epigenetic mechanisms governed by Xist RNA during X-chromosome inactivation (XCI).
- To highlight recent findings on Xist RNA interaction partners and their impact on understanding XCI.
- To discuss how these discoveries address existing controversies and open new research avenues in epigenetics.
Main Methods:
- Review of recent scientific literature and studies.
- Analysis of Xist RNA's role in recruiting epigenetic modifiers.
- Characterization of Xist RNA's interaction partners and functional consequences.
Main Results:
- Xist RNA orchestrates numerous epigenetic events essential for XCI.
- Identification of Xist RNA's interaction partners provides insights into its regulatory functions.
- Recent studies have resolved long-standing questions and proposed novel research directions in XCI.
Conclusions:
- Xist RNA is central to establishing and maintaining dosage compensation through complex epigenetic regulation.
- Understanding Xist RNA interactions is key to deciphering the intricacies of XCI.
- This review honors Denise Barlow's foundational contributions to lncRNAs and epigenetics.
Related Concept Videos
Inheritance of Chromatin Structures
7.3K
Epigenetics is the study of inherited changes in a cell's phenotype without changing the DNA sequences. It provides a form of memory for the differential gene expression pattern to maintain cell lineage, position-effect variegation, dosage compensation, and maintenance of chromatin structures such as telomeres and centromeres. For example, the structure and location of the centromere on chromosomes are epigenetically inherited. Its functionality is not dictated or ensured by the underlying...
7.3K
RNA Stability
35.6K
Intact DNA strands can be found in fossils, while scientists sometimes struggle to keep RNA intact under laboratory conditions. The structural variations between RNA and DNA underlie the differences in their stability and longevity. Because DNA is double-stranded, it is inherently more stable. The single-stranded structure of RNA is less stable but also more flexible and can form weak internal bonds. Additionally, most RNAs in the cell are relatively short, while DNA can be up to 250 million...
35.6K
Types of RNA
72.6K
Overview
Three main types of RNA are involved in protein synthesis: messenger RNA (mRNA), transfer RNA (tRNA), and ribosomal RNA (rRNA). These RNAs perform diverse functions and can be broadly classified as protein-coding or non-coding RNA. Non-coding RNAs play important roles in the regulation of gene expression in response to developmental and environmental changes. Non-coding RNAs in prokaryotes can be manipulated to develop more effective antibacterial drugs for human or animal use.
RNA...
Three main types of RNA are involved in protein synthesis: messenger RNA (mRNA), transfer RNA (tRNA), and ribosomal RNA (rRNA). These RNAs perform diverse functions and can be broadly classified as protein-coding or non-coding RNA. Non-coding RNAs play important roles in the regulation of gene expression in response to developmental and environmental changes. Non-coding RNAs in prokaryotes can be manipulated to develop more effective antibacterial drugs for human or animal use.
RNA...
72.6K
Types of RNA
9.1K
Three main types of RNA are involved in protein synthesis: messenger RNA (mRNA), transfer RNA (tRNA), and ribosomal RNA (rRNA). These RNAs perform diverse functions and can be broadly classified as protein-coding or non-coding RNA. Non-coding RNAs play important roles in regulating gene expression in response to developmental and environmental changes. Non-coding RNAs in prokaryotes can be manipulated to develop more effective antibacterial drugs for human or animal use.
RNA Performs Diverse...
RNA Performs Diverse...
9.1K
Chromatin Structure Regulates pre-mRNA Processing
8.1K
In eukaryotic cells, nascent mRNA transcripts need to undergo many post-transcriptional modifications to reach the cell cytoplasm and translate into functional proteins. For a long time, transcription and pre-mRNA processing were considered two independent events that occur sequentially in the cell. However, it has now been well established that transcription and pre-mRNA processing are two simultaneous processes that are precisely regulated inside the cell.
The chromatin structure, especially...
The chromatin structure, especially...
8.1K
Alternative RNA Splicing
24.7K
Alternative RNA splicing is the regulated splicing of exons and introns to produce different mature mRNAs from a single pre-mRNA. Unlike in constitutive splicing where a single gene produces a single type of mRNA, alternative splicing allows an organism to produce multiple proteins from a single gene and plays an important role in protein diversity.
There are five types of alternative RNA splicing that vary in the ways the pre-mRNA segments are removed or retained in the mature mRNA. The first...
There are five types of alternative RNA splicing that vary in the ways the pre-mRNA segments are removed or retained in the mature mRNA. The first...
24.7K


