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Updated: Jan 19, 2026

In Silico Clinical Trials for Cardiovascular Disease
Published on: May 27, 2022
Three-Dimensional Heart Model-Based Screening of Proarrhythmic Potential by in silico Simulation of Action Potential
Minki Hwang1, Seunghoon Han2,3, Min Cheol Park4
1SiliconSapiens Inc., Seoul, South Korea.
Insights
This study simulated body-surface ECGs to assess drug proarrhythmic risk. 3D ECG simulations show promise as a new biomarker for drug safety evaluation.
Area of Science:
- Cardiovascular pharmacology
- Computational biology
- Medical imaging
Background:
- Proarrhythmic risk assessment is critical in drug development.
- Existing biomarkers like the QT interval have limitations.
- The Comprehensive in vitro Proarrhythmia Assay (CiPA) proposes JTpeak and qNet as novel biomarkers.
Purpose of the Study:
- To explore the suitability of 3D body-surface ECG simulations as in silico biomarkers for cardiac safety.
- To evaluate drug-induced proarrhythmic risk using realistic patient-specific models.
Main Methods:
- Simulated body-surface ECGs using patient-specific human ventricular geometry from CT scans.
- Incorporated drug effects by modeling ion channel blockade based on patch-clamp data.
- Utilized finite-element methods to solve reaction-diffusion equations for electrical wave propagation.
- Calculated body-surface ECGs using a torso model.
Main Results:
- In silico simulations identified dofetilide as proarrhythmic at 5x Cmax.
- Verapamil and ranolazine did not induce arrhythmia in the simulations.
- The simulation did not reproduce the non-increasing JTpeak observed in humans for verapamil and ranolazine.
Conclusions:
- 3D body-surface ECG simulation holds potential as a biomarker for evaluating drug proarrhythmic risk.
- This in silico approach can complement existing methods in drug safety assessment.
- Further refinement is needed to fully replicate human clinical observations.
Abstract:
The proarrhythmic risk is a major concern in drug development. The Comprehensive in vitro Proarrhythmia Assay (CiPA) initiative has proposed the JTpeak interval on electrocardiograms (ECGs) and qNet, an in silico metric, as new biomarkers that may overcome the limitations of the hERG assay and QT interval. In this study, we simulated body-surface ECGs from patch-clamp data using realistic models of the ventricles and torso to explore their suitability as new in silico biomarkers for cardiac safety. We tested seven drugs in this study: dofetilide (high proarrhythmic risk), ranolazine, verapamil (QT increasing, but safe), bepridil, cisapride, mexiletine, and diltiazem. Human ventricular geometry was reconstructed from computed tomography (CT) images, and a Purkinje fiber network was mapped onto the endocardial surface. The electrical wave propagation in the ventricles was obtained by solving a reaction-diffusion equation using finite-element methods. The body-surface ECG data were calculated using a torso model that included the ventricles. The effects of the drugs were incorporated in the model by partly blocking the appropriate ion channels. The effects of the drugs on single-cell action potential (AP) were examined first, and three-dimensional (3D) body-surface ECG simulations were performed at free Cmax values of 1×, 5×, and 10×. In the single-cell and ECG simulations at 5× Cmax, dofetilide, but not verapamil or ranolazine, caused arrhythmia. However, the non-increasing JTpeak caused by verapamil and ranolazine that has been observed in humans was not reproduced in our simulation. Our results demonstrate the potential of 3D body-surface ECG simulation as a biomarker for evaluation of the proarrhythmic risk of candidate drugs.
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