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Automated clear cell renal carcinoma grade classification with prognostic significance
Katherine Tian1,2, Christopher A Rubadue1, Douglas I Lin1
1Department of Pathology, Harvard Medical School, Beth Israel Deaconess Medical Center, Boston, MA, United States of America.
Plos One
|October 4, 2019
Summary
An automated system accurately grades clear cell renal cell carcinoma (ccRCC) using 72 features from whole slide images. This computational grading shows prognostic value for overall survival, outperforming manual grading in a TCGA cohort.
Area of Science:
- Computational pathology
- Renal cell carcinoma research
- Digital pathology image analysis
Background:
- Clear cell renal cell carcinoma (ccRCC) grading is crucial for prognosis.
- Traditional grading relies on manual histopathological assessment, which can be subjective.
- Automated systems offer potential for objective and reproducible cancer grading.
Purpose of the Study:
- To develop and validate an automated 2-tiered Fuhrman's grading system for ccRCC using whole slide images (WSI).
- To assess the prognostic efficacy of the automated grading system compared to manual grading.
Main Methods:
- Utilized 395 The Cancer Genome Atlas (TCGA) ccRCC cases with WSIs and clinical data.
- Extracted 72 quantitative morphological, intensity, and texture features from nuclear regions.
- Developed a Lasso model to identify features associated with grade and predict grading outcomes.
Main Results:
- The Lasso model, using 26 features, achieved 84.6% sensitivity and 81.3% specificity in predicting ccRCC grade.
- The automated predicted grade was significantly associated with overall survival in an extended test set (HR 2.05).
- Manually assigned grades did not demonstrate prognostic significance in the study cohort.
Conclusions:
- An automated computational system can effectively perform 2-tiered Fuhrman's grading for ccRCC.
- The developed automated grading system shows prognostic value for patient survival.
- Future research should focus on adapting and validating this system for WHO/ISUP grading and diverse ccRCC cohorts.

