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Applying density-based outlier identifications using multiple datasets for validation of stroke clinical outcomes.
Ching-Heng Lin1, Kai-Cheng Hsu2, Kory R Johnson3
1Center for Information Technology, National Institutes of Health, Bethesda, MD, United States.
International Journal of Medical Informatics
|October 8, 2019
Summary
Density-based outlier detection methods effectively identified errors in stroke outcome measures like the modified Rankin Scale (mRS) and Barthel Index (BI). This improves data quality for machine learning models predicting stroke outcomes.
Area of Science:
- Neurology
- Data Science
- Biostatistics
Background:
- The modified Rankin Scale (mRS) and Barthel Index (BI) are crucial for assessing stroke patient outcomes.
- Accurate measurement is vital for developing reliable machine learning models for stroke prediction.
- Data quality directly impacts the validity and performance of predictive models.
Purpose of the Study:
- To evaluate density-based outlier detection methods for identifying measurement errors in stroke outcome data.
- To assess the efficacy of these methods across multiple large-scale stroke datasets.
- To enhance the quality of data used in stroke outcome prediction models.
Main Methods:
- Applied three density-based outlier detection algorithms: DBSCAN, HDBSCAN, and LOF.
- Utilized a large dataset from a Taiwanese prospective stroke registry for initial development.
- Validated the methods on four independent NINDS-funded stroke datasets.
Main Results:
- DBSCAN demonstrated high accuracy across various mRS scores, with the highest average accuracy at mRS 4 (99.2%).
- LOF showed comparable performance to DBSCAN.
- HDBSCAN required parameter tuning for optimal performance.
Conclusions:
- Density-based outlier detection is a promising approach for validating stroke outcome measures.
- An algorithm developed on a large registry dataset proved effective on external datasets.
- This tool can improve data quality for real-world stroke outcome assessments.

