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A predicted risk score based on the expression of 16 autophagy-related genes for multiple myeloma survival
Fang-Xiao Zhu1, Xiao-Tao Wang2, Hui-Qiong Zeng1
1Department of Rheumatology, Shenzhen Futian Hospital for Rheumatic Diseases, Shenzhen, Guangdong 518040, P.R. China.
Abstract:
Autophagy has an important role in the pathogenesis of plasma cell development and multiple myeloma (MM); however, the prognostic role of autophagy-related genes (ARGs) in MM remains undefined. In the present study, the expression profiles of 234 ARGs were obtained from a Gene Expression Omnibus dataset (accession GSE24080), which contains 559 samples of patients with MM analyzed with 54,675 probes. Univariate Cox regression analysis identified 55 ARGs that were significantly associated with event-free survival of MM. Furthermore, a risk score with 16 survival-associated ARGs was developed using multivariate Cox regression analysis, including ATIC, BNIP3L, CALCOCO2, DNAJB1, DNAJB9, EIF4EBP1, EVA1A, FKBP1B, FOXO1, FOXO3, GABARAP, HIF1A, NCKAP1, PRKAR1A and SUPT20H, was constructed. Using this prognostic signature, patients with MM could be separated into high- and low-risk groups with distinct clinical outcomes. The area under the curve values for the receiver operating characteristic curves were 0.740, 0.741 and 0.712 for 3, 5 and 10 years prognosis predictions, respectively. Notably, the prognostic role of this risk score could be validated with another four independent cohorts (accessions: GSE57317, GSE4581, GSE4452 and GSE4204). In conclusion, ARGs may serve vital roles in the progression of MM, and the ARGs-based prognostic model may provide novel ideas for clinical applications in MM.
Insights
Autophagy-related genes (ARGs) impact multiple myeloma (MM) progression. A new 16-gene prognostic model accurately predicts patient outcomes and could guide clinical treatment strategies for MM.
Area of Science:
- Oncology
- Molecular Biology
- Genetics
Background:
- Autophagy plays a role in plasma cell development and multiple myeloma (MM) pathogenesis.
- The prognostic significance of autophagy-related genes (ARGs) in MM is not well-defined.
Purpose of the Study:
- To investigate the prognostic role of ARGs in MM.
- To develop a predictive model for MM patient survival based on ARG expression.
Main Methods:
- Expression profiles of 234 ARGs were analyzed from the GSE24080 dataset (559 MM samples).
- Univariate and multivariate Cox regression analyses were used to identify survival-associated ARGs.
- A 16-gene risk score model was constructed and validated in four independent cohorts.
Main Results:
- 55 ARGs were significantly associated with event-free survival in MM.
- A 16-gene prognostic signature was developed, effectively stratifying patients into high- and low-risk groups.
- The model demonstrated good predictive accuracy (AUCs of 0.740, 0.741, and 0.712 for 3, 5, and 10 years, respectively) and was validated across multiple cohorts.
Conclusions:
- ARGs are crucial in MM progression.
- The developed ARG-based prognostic model offers potential for clinical application in MM patient management and outcome prediction.
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