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Updated: Jan 5, 2026

High-throughput Identification of Synergistic Drug Combinations by the Overlap2 Method
Published on: May 21, 2018
Different Pathways Mediate Amphotericin-Lactoferrin Drug Synergy in Cryptococcus and Saccharomyces
Yu-Wen Lai1, Chi Nam Ignatius Pang2, Leona T Campbell1
1School of Life and Environmental Sciences, The University of Sydney, Sydney, NSW, Australia.
Abstract:
Fungal infections are an increasing cause of morbidity and mortality. Current antifungal drugs are limited in spectrum, few new drugs are in development, and resistance is an increasing issue. Drug synergy can enhance available drugs and extend their lifetime, however, few synergistic combinations are in clinical use and mechanistic data on how combinations work is lacking. The multifunctional glycoprotein lactoferrin (LF) acts synergistically with amphotericin B (AMB) in a range of fungal species. Whole LF binds and sequesters iron, and LF can also be digested enzymatically to produce cationic peptides with distinct antimicrobial functions. To understand how LF synergizes AMB, we previously undertook a transcriptomic analysis in Saccharomyces and found a paradoxical down-regulation of iron and stress response, suggesting stress pathway interference was dysregulating an appropriate response, resulting in cell death. To extend this to a fungal pathogen, we here perform the same analysis in Cryptococcus neoformans. While both fungi responded to AMB in a similar way, the addition of LF produced remarkably contrasting results, with the Cryptococcus transcriptome enriched for processes relating to cellular stress, up-regulation of endoplasmic-reticulum-associated protein degradation (ERAD), stress granule disassembly and protein folding, endoplasmic reticulum-Golgi-vacuole trafficking and autophagy, suggesting an overall disruption of protein and lipid biosynthesis. These studies demonstrate that the mechanism of LF-mediated synergy is species-specific, possibly due to differences in the way LF peptides are generated, bind to and enter cells and act on intracellular targets, illustrating how very different cellular processes can underlie what appears to be a similar phenotypic response.
Insights
Lactoferrin (LF) enhances antifungal drug amphotericin B (AMB) effectiveness. However, LF’s synergistic mechanism differs between fungal species, impacting cellular processes like stress response and protein biosynthesis.
Area of Science:
- Medical Mycology
- Molecular Biology
- Drug Discovery
Background:
- Fungal infections pose a growing health threat due to limited antifungal drug options and increasing resistance.
- Drug synergy offers a strategy to enhance existing antifungals, but mechanistic understanding is lacking.
- Lactoferrin (LF) shows synergy with amphotericin B (AMB), but its mechanism requires elucidation.
Purpose of the Study:
- To investigate the species-specific transcriptomic response of *Cryptococcus neoformans* to lactoferrin (LF) and amphotericin B (AMB) combination therapy.
- To compare the synergistic mechanism of LF and AMB in *Cryptococcus neoformans* with previous findings in *Saccharomyces*.
Main Methods:
- Comparative transcriptomic analysis of *Cryptococcus neoformans* exposed to AMB alone and in combination with LF.
- Bioinformatic analysis to identify enriched biological pathways and gene expression patterns.
Main Results:
- While both *Saccharomyces* and *Cryptococcus* showed AMB-induced stress, LF's addition elicited contrasting transcriptomic responses.
- *Cryptococcus* transcriptome analysis revealed enrichment in cellular stress, ERAD, protein folding, and autophagy pathways upon LF+AMB treatment.
- These findings suggest LF-mediated synergy disrupts protein and lipid biosynthesis in *Cryptococcus*.
Conclusions:
- The mechanism of lactoferrin-mediated antifungal synergy is species-specific.
- Differences in LF peptide generation, cell interaction, and intracellular targets likely contribute to varied synergistic mechanisms.
- Understanding these species-specific pathways is crucial for developing effective combination antifungal therapies.

