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A Phenotyping Regimen for Genetically Modified Mice Used to Study Genes Implicated in Human Diseases of Aging
Published on: July 14, 2016
Human geroprotector discovery by targeting the converging subnetworks of aging and age-related diseases
Jialiang Yang1,2, Shouneng Peng1,2, Bin Zhang1,2
1Institute of Genomics and Multiscale Biology, Icahn School of Medicine at Mount Sinai, New York, New York City, USA.
Abstract:
A key goal of geroscience research is to identify effective interventions to extend human healthspan, the years of healthy life. Currently, majority of the geroprotectors are found by screening compounds in model organisms; whether they will be effective in humans is largely unknown. Here we present a new strategy called ANDRU (aging network based drug discovery) to help the discovery of human geroprotectors. It first identifies human aging subnetworks that putatively function at the interface between aging and age-related diseases; it then screens for pharmacological interventions that may "reverse" the age-associated transcriptional changes occurred in these subnetworks. We applied ANDRU to human adipose gene expression data from the Genotype Tissue Expression (GTEx) project. For the top 31 identified compounds, 19 of them showed at least some evidence supporting their function in improving metabolic traits or lifespan, which include type 2 diabetes drugs such as pioglitazone. As the query aging genes were refined to the ones with more intimate links to diseases, ANDRU identified more meaningful drug hits than the general approach without considering the underlying network structures. In summary, ANDRU represents a promising human data-driven strategy that may speed up the discovery of interventions to extend human healthspan.
Insights
A new human data-driven strategy, Aging Network Based Drug Discovery (ANDRU), identifies potential human healthspan extension interventions. This approach prioritizes aging subnetworks linked to diseases, yielding promising drug candidates like pioglitazone.
Area of Science:
- Geroscience
- Computational Biology
- Pharmacology
Background:
- Extending human healthspan is a major geroscience goal.
- Current geroprotector discovery relies heavily on model organisms, with uncertain human efficacy.
- Identifying human-specific aging pathways is crucial for effective intervention discovery.
Purpose of the Study:
- To introduce and validate the Aging Network Based Drug Discovery (ANDRU) strategy for identifying human geroprotectors.
- To leverage human aging subnetworks and transcriptional data for drug discovery.
- To improve the identification of interventions targeting aging and age-related diseases.
Main Methods:
- Developed the ANDRU strategy to identify human aging subnetworks at the interface of aging and disease.
- Screened for pharmacological interventions to reverse age-associated transcriptional changes within these subnetworks.
- Applied ANDRU to human adipose gene expression data from the Genotype Tissue Expression (GTEx) project.
Main Results:
- ANDRU identified 31 potential compounds, with 19 showing evidence for improving metabolic traits or lifespan.
- Notable hits included type 2 diabetes drugs like pioglitazone.
- Refining aging genes to those with stronger disease links increased the identification of meaningful drug candidates.
Conclusions:
- ANDRU is a promising human data-driven strategy for accelerating the discovery of healthspan-extending interventions.
- The network-based approach improves the identification of geroprotective drug candidates compared to general screening.
- This method holds potential for discovering interventions against age-related diseases.
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