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Regression Clustering for Improved Accuracy and Training Costs with Molecular-Orbital-Based Machine Learning
Lixue Cheng1, Nikola B Kovachki2, Matthew Welborn1
1Division of Chemistry and Chemical Engineering , California Institute of Technology , Pasadena , California 91125 , United States.
This study introduces a new machine learning approach using regression clustering for molecular orbital features. This method significantly speeds up the prediction of molecular energies while maintaining high accuracy, even for large datasets.
Area of Science:
- Computational Chemistry
- Machine Learning in Quantum Chemistry
Background:
- Machine learning (ML) applied to molecular-orbital-based (MOB) features accurately predicts post-Hartree-Fock correlation energies.
- Gaussian Process Regression (GPR) is effective for small datasets but computationally expensive for large ones due to cubic scaling.
Purpose of the Study:
- To develop a more computationally efficient ML approach for predicting molecular energies.
- To overcome the training time bottleneck of GPR in MOB-ML for large datasets.
Main Methods:
- Introduced a novel regression clustering (RC) implementation for MOB-ML.
- Combined RC with linear regression (LR) or GPR for cluster-specific regression and a random forest classifier (RFC) for cluster assignment.
- Evaluated RC/LR/RFC and RC/GPR/RFC on the QM7b-T dataset of organic molecules.
Main Results:
- RC identified chemically intuitive groupings of frontier molecular orbitals.
- Both RC/LR/RFC and RC/GPR/RFC achieved chemical accuracy (1 kcal/mol error) with significantly reduced training times (35,000x and 4,500x faster, respectively).
- Models demonstrated transferability to larger molecules using small-molecule training data, with further accuracy improvements by capping cluster data points.
Conclusions:
- The RC-based MOB-ML approach offers a substantial speedup in training time without sacrificing prediction accuracy.
- This method provides a scalable and efficient alternative for predicting molecular energies, applicable to large datasets and transferable to different molecular sizes.
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