Related Experiment Video
Updated: Sep 21, 2026

Scanning Electron Microscopy SEM Protocols for Problematic Plant, Oomycete, and Fungal Samples
Published on: February 3, 2017
Bioimaging structural signatures of the oomycete pathogen Sclerospora graminicola in pearl millet using different
Hunthrike Shekar Shetty1, Sharada Mysore Suryanarayan2, Sudisha Jogaiah3
1Department of Biotechnology, University of Mysore, Manasagangothri, Mysore, 570 006, India.
Abstract:
In this case study, the mycelium growth of Sclerospora graminicola in the infected tissues of pearl millet and the process of sporulation and liberation of sporangia and zoospores were observed using four different microscopic techniques. The cotton blue-stained samples observed under light microscope revealed the formation of zoospores with germ tubes, appressoria and initiation of haustorium into the host cells, while the environmental scanning electron microscopy showed the rapid emergence of sporangiophores with dispersed sporangia around the stomata. For fluorescence microscopy, the infected leaf samples were stained with Fluorescent Brightener 28 and Calcofluor White, which react with β-glucans present in the mycelial walls, sporangiophores and sporangia. Calcoflour White was found to be the most suitable for studying the structural morphology of the pathogen. Therefore, samples observed by confocal laser scanning microscopy (CLSM) were pre-treated with Calcofluor White, as well as with Syto-13 that can stain the cell nuclei. Among the four microscopic techniques, CLSM is ideal for observing live host-pathogen interaction and studying the developmental processes of the pathogen in the host tissues. The use of different microscopic bioimaging techniques to study pathogenesis will enhance our understanding of the morphological features and development of the infectious propagules in the host.
Insights
This study explored Sclerospora graminicola in pearl millet using microscopy. Confocal laser scanning microscopy (CLSM) proved ideal for observing live host-pathogen interactions and pathogen development.
Area of Science:
- Plant Pathology
- Microscopy
- Mycology
Background:
- Pearl millet is susceptible to Sclerospora graminicola, a significant pathogen.
- Understanding pathogen development within host tissues is crucial for disease management.
Purpose of the Study:
- To compare four microscopic techniques for visualizing Sclerospora graminicola development in pearl millet.
- To identify the most effective method for studying live host-pathogen interactions.
Main Methods:
- Light microscopy with cotton blue staining.
- Environmental scanning electron microscopy.
- Fluorescence microscopy using Fluorescent Brightener 28 and Calcofluor White.
- Confocal laser scanning microscopy (CLSM) with Calcofluor White and Syto-13 staining.
Main Results:
- Light microscopy revealed zoospores, germ tubes, appressoria, and haustoria.
- Environmental scanning electron microscopy showed sporangiophores emerging from stomata.
- Calcofluor White was superior for visualizing pathogen structural morphology.
- CLSM enabled detailed observation of live host-pathogen interactions and pathogen development.
Conclusions:
- Confocal laser scanning microscopy (CLSM) is the optimal technique for studying live host-pathogen interactions and pathogen developmental processes.
- Advanced bioimaging techniques enhance understanding of pathogen morphology and infectious propagule development.
More Related Videos
11:48Microscopy Techniques for Interpreting Fungal Colonization in Mycoheterotrophic Plants Tissues and Symbiotic Germination of Seeds
Published on: May 17, 2022
07:36Visualizing Early Infection Sites of Rice Blast Disease Magnaporthe oryzae on Barley Hordeum vulgare Using a Basic Microscope and a Smartphone
Published on: March 17, 2023