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A Strategy to Identify de Novo Mutations in Common Disorders such as Autism and Schizophrenia
Published on: June 15, 2011
Within family Mendelian randomization studies
Neil M Davies1,2, Laurence J Howe1,2, Ben Brumpton1,3,4
1Medical Research Council Integrative Epidemiology Unit, University of Bristol, Bristol, BS8 2BN, United Kingdom.
Abstract:
Mendelian randomization (MR) is increasingly used to make causal inferences in a wide range of fields, from drug development to etiologic studies. Causal inference in MR is possible because of the process of genetic inheritance from parents to offspring. Specifically, at gamete formation and conception, meiosis ensures random allocation to the offspring of one allele from each parent at each locus, and these are unrelated to most of the other inherited genetic variants. To date, most MR studies have used data from unrelated individuals. These studies assume that genotypes are independent of the environment across a sample of unrelated individuals, conditional on covariates. Here we describe potential sources of bias, such as transmission ratio distortion, selection bias, population stratification, dynastic effects and assortative mating that can induce spurious or biased SNP-phenotype associations. We explain how studies of related individuals such as sibling pairs or parent-offspring trios can be used to overcome some of these sources of bias, to provide potentially more reliable evidence regarding causal processes. The increasing availability of data from related individuals in large cohort studies presents an opportunity to both overcome some of these biases and also to evaluate familial environmental effects.
Insights
Mendelian randomization (MR) studies can be biased by factors like selection and population stratification. Analyzing data from related individuals, such as sibling pairs, can provide more reliable causal inference in genetic epidemiology.
Area of Science:
- Epidemiology
- Genetics
- Biostatistics
Background:
- Mendelian randomization (MR) is a powerful tool for causal inference in various scientific fields.
- MR relies on random genetic inheritance from parents to offspring.
- Most MR studies use unrelated individuals, assuming genotype independence from environmental factors.
Purpose of the Study:
- To identify potential sources of bias in Mendelian randomization studies.
- To explore how using data from related individuals can overcome these biases.
- To enhance the reliability of causal inference in genetic epidemiology.
Main Methods:
- Review of potential biases in MR studies using unrelated individuals, including transmission ratio distortion, selection bias, population stratification, dynastic effects, and assortative mating.
- Explanation of how studies involving related individuals (e.g., sibling pairs, parent-offspring trios) can mitigate these biases.
- Discussion of the utility of large cohort studies with related individuals for causal inference and familial environmental effect evaluation.
Main Results:
- Identified several biases that can lead to spurious or biased SNP-phenotype associations in traditional MR studies.
- Demonstrated that studies of related individuals offer a robust approach to overcome specific biases.
- Highlighted the potential of familial data to provide more reliable causal evidence.
Conclusions:
- Studies utilizing related individuals can yield more trustworthy causal inferences in Mendelian randomization.
- The increasing availability of data from related individuals in large cohorts presents a significant opportunity for advancing genetic epidemiology.
- This approach can also facilitate the evaluation of familial environmental influences on health outcomes.
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