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Related Concept Videos

Next-generation Sequencing03:00

Next-generation Sequencing

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The first human genome sequencing project cost $2.7 billion and was declared complete in 2003, after 15 years of international cooperation and collaboration between several research teams and funding agencies. Today, with the advent of next-generation sequencing technologies, the cost and time of sequencing a human genome have dropped over 100 fold.
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RNA-seq03:21

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RNA sequencing, or RNA-Seq, is a high-throughput sequencing technology used to study the transcriptome of a cell. Transcriptomics helps to interpret the functional elements of a genome and identify the molecular constituents of an organism. Additionally, it also helps in understanding the development of an organism and the occurrence of diseases. 
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Sanger Sequencing01:57

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DNA sequencing is a fundamental technique that is routinely used in the biological sciences. This method can be applied to a range of questions at different scales - from the sequencing of a cloned DNA fragment or the study of a mutation in a gene up to whole-genome sequencing. However, despite the widespread use of sequencing today, it was not until 1977 that Fredrick Sanger and his collaborators developed the chain-termination method to decode DNA sequences. It relies on the separation of a...
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Maxam-Gilbert Sequencing01:05

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In the same year as the discovery of the Sanger sequencing method, another group of scientists, Allan Maxam and Walter Gilbert, demonstrated their chemical-cleavage method for DNA sequencing. The Maxam-Gilbert method relies on using different chemicals that can cleave the DNA sequence at specific sites, the separation of resulting DNA fragments of variable size using electrophoresis, and deciphering the DNA sequence from the resulting gel bands.
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The genome refers to all of the genetic material in an organism. It can range from a few million base pairs in microbial cells to several billion base pairs in many eukaryotic organisms. Genome assembly refers to the process of taking the DNA sequencing data and putting it all back together in a correct order to create a close representation of the original genome. This is followed by the identification of functional elements on the newly assembled genome, a process called genome annotation.
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Rare Event Detection Using Error-corrected DNA and RNA Sequencing
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The Implementation of Predictions During Sequencing.

M Molinari1, M Masciullo1

  • 1IRCCS Fondazione Santa Lucia, Rome, Italy.

Frontiers in Cellular Neuroscience
|October 26, 2019
PubMed
Summary
This summary is machine-generated.

The cerebellum

Keywords:
cognitionemotionsforward internal modelprediction errorsequencing

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Area of Science:

  • Neuroscience
  • Cognitive Science
  • Motor Control

Background:

  • Optimal control requires prediction.
  • The brain constantly predicts future events for smooth movement and social interaction.
  • Sequencing is key to discovering spatiotemporal links between events for prediction.

Purpose of the Study:

  • To propose that the cerebellum's function is based on sequence detection, crucial for prediction.
  • To explain how the cerebellum generates internal models for prediction through comparing expected and actual event patterns.
  • To discuss the role of cerebellar sequencing in feedforward control and adaptive responses.

Main Methods:

  • Review of human and animal studies on cerebellar function.
  • Correlation of findings with current understanding of cerebellar roles in cognition and behavior.
  • Theoretical proposal of the cerebellum's 'sequence detection' operational mode.

Main Results:

  • The cerebellum compares expected event sequences (via pontine nuclei) with actual events (via climbing fibers).
  • This comparison allows the cerebellum to generate internal models for prediction and detect sequence violations.
  • Cerebellar sequencing enables feedforward control by setting appropriate neural excitation levels for adaptive responses.

Conclusions:

  • Cerebellar sequence detection is fundamental for predictive capabilities across motor and cognitive domains.
  • The cerebellum's predictive function, enabled by sequencing, is vital for adaptive behavior and interaction.
  • This mechanism underlies how the brain anticipates and responds to familiar patterns of stimuli.