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lncRNA - Long Non-coding RNAs02:39

lncRNA - Long Non-coding RNAs

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In humans, more than 80% of the genome gets transcribed. However, only around 2% of the genome codes for proteins. The remaining part produces non-coding RNAs which includes ribosomal RNAs, transfer RNAs, telomerase RNAs, and regulatory RNAs, among other types. A large number of regulatory non-coding RNAs have been classified into two groups depending upon their length – small non-coding RNAs, such as microRNA, which are less than 200 nucleotides in length, and long non-coding RNA...
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Identification of RNAs Engaged in Direct RNA-RNA Interaction with a Long Non-Coding RNA
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Recent Advances on the Semi-Supervised Learning for Long Non-Coding RNA-Protein Interactions Prediction: A Review.

Lin Zhong1, Zhong Ming2,3, Guobo Xie4

  • 1School of Mathematics, Liaoning University, Shenyang, 110036, China.

Protein and Peptide Letters
|October 27, 2019
PubMed
Summary
This summary is machine-generated.

Long non-coding RNAs (lncRNAs) are crucial in biological processes and diseases like cancer. This review explores computational models for predicting lncRNA-protein interactions, aiding disease research.

Keywords:
biological processescomputational prediction modelsinteractions predictionlncRNAproteinsemi-supervised learning.

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Area of Science:

  • Molecular Biology
  • Genomics
  • Bioinformatics

Background:

  • Long non-coding RNAs (lncRNAs) are key regulators in cellular processes like chromatin modification and differentiation.
  • Dysregulation of lncRNAs is implicated in various human diseases, including cancer.
  • Understanding lncRNA functions requires knowledge of their interactions with proteins.

Purpose of the Study:

  • To review computational models for predicting lncRNA-protein interactions.
  • To highlight models based on semi-supervised learning developed in the last two years.
  • To discuss the strengths and weaknesses of these predictive models.

Main Methods:

  • Literature review of recent computational prediction models for lncRNA-protein interactions.
  • Focus on models employing semi-supervised learning techniques.
  • Analysis of model advantages and limitations.

Main Results:

  • Several semi-supervised learning-based computational models for lncRNA-protein interaction prediction have emerged.
  • These models offer alternatives to time-consuming experimental methods.
  • Each model presents unique advantages and limitations in prediction accuracy and applicability.

Conclusions:

  • Computational prediction of lncRNA-protein interactions is vital for understanding lncRNA functions and disease mechanisms.
  • Semi-supervised learning approaches show promise in this field.
  • Further research is needed to refine models and explore future directions in lncRNA-protein interaction prediction.