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Updated: Jan 5, 2026

Daily Transfers, Archiving Populations, and Measuring Fitness in the Long-Term Evolution Experiment with Escherichia coli
Published on: August 18, 2023
Adaptation, fitness landscape learning and fast evolution
John Reinitz1, Sergey Vakulenko2, Dmitri Grigoriev3
1Departments of Statistics, Ecology and Evolution, Molecular Genetics and Cell Biology, University of Chicago, Chicago, IL, USA.
Abstract:
We consider evolution of a large population, where fitness of each organism is defined by many phenotypical traits. These traits result from expression of many genes. Under some assumptions on fitness we prove that such model organisms are capable, to some extent, to recognize the fitness landscape. That fitness landscape learning sharply reduces the number of mutations needed for adaptation. Moreover, this learning increases phenotype robustness with respect to mutations, i.e., canalizes the phenotype. We show that learning and canalization work only when evolution is gradual. Organisms can be adapted to many constraints associated with a hard environment, if that environment becomes harder step by step. Our results explain why evolution can involve genetic changes of a relatively large effect and why the total number of changes are surprisingly small.
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