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Related Experiment Video

Updated: Jan 5, 2026

Characterization of Neuronal Lysosome Interactome with Proximity Labeling Proteomics
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OPA-Based Bifunctional Linker for Protein Labeling and Profiling.

Qing Zhang1, Yue Zhang1, Heng Liu1

  • 1Department of Chemistry, State Key Laboratory of Synthetic Chemistry , The University of Hong Kong , Hong Kong , People's Republic of China, SAR.

Biochemistry
|October 29, 2019
PubMed
Summary
This summary is machine-generated.

Researchers developed a new ortho-phthalaldehyde (OPA)-based linker for efficient protein labeling. This OPA-NH-alkyne linker offers a cost-effective and stable alternative for chemical modification and profiling of proteins.

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Area of Science:

  • Biochemistry
  • Chemical Biology
  • Proteomics

Background:

  • Lysine residues are common sites for protein chemical labeling and modification.
  • Existing lysine-labeling agents present challenges in efficiency, stability, and cost.

Purpose of the Study:

  • To develop novel bifunctional linkers for protein chemical labeling and profiling.
  • To identify an optimal ortho-phthalaldehyde (OPA)-based linker for improved protein modification.

Main Methods:

  • Design and synthesis of three OPA-based bifunctional linkers.
  • Evaluation of linker performance for protein labeling, focusing on efficiency and minimizing protein turbidity.
  • Demonstration of the optimal linker's applicability in immediate protein and proteome capture labeling.

Main Results:

  • OPA-NH-alkyne 5 was identified as the optimal OPA-based bifunctional linker.
  • This linker demonstrated efficient protein labeling with minimal induced protein turbidity.
  • The OPA-NH-alkyne 5 linker proved effective for immediate capture of proteins and proteomes.

Conclusions:

  • The developed OPA-NH-alkyne 5 linker provides an effective and potentially cost-efficient strategy for protein chemical labeling.
  • This new reagent expands the toolkit for protein modification, profiling, and proteomic studies.