Related Experiment Video
Updated: Jan 4, 2026

Induction of Intestinal Inflammation by Adoptive Transfer of CBir1 TCR Transgenic CD4+ T Cells to Immunodeficient Mice
Published on: December 16, 2021
SCGN deficiency results in colitis susceptibility.
Luis F Sifuentes-Dominguez1, Haiying Li2, Ernesto Llano2
1Department of Pediatrics, University of Texas Southwestern Medical Center, Dallas, United States.
A rare variant in the SCGN gene causes early-onset ulcerative colitis by impairing hormone release from gut neuroendocrine cells. This discovery highlights SCGN
Area of Science:
- Genetics and Molecular Biology
- Gastroenterology
- Neuroendocrinology
Background:
- Inflammatory bowel disease (IBD) has a significant genetic component, but much of the genetic predisposition remains unexplained.
- The SCGN gene encodes a calcium sensor protein crucial for vesicle fusion in neuroendocrine cells.
Purpose of the Study:
- To identify novel genetic factors contributing to unexplained IBD.
- To investigate the role of the SCGN gene in the pathogenesis of early-onset ulcerative colitis.
Main Methods:
- Identification and characterization of an ultrarare missense variant in the SCGN gene.
- Assessment of the variant's impact on SCGN protein function, including SNARE complex interaction and hormone release.
- Evaluation of Scgn-deficient mouse models for intestinal inflammation and hormone release defects.
Main Results:
- An ultrarare SCGN missense variant (p.Arg77His) was identified as a cause of Mendelian early-onset ulcerative colitis.
- The identified SCGN mutation disrupted SNAP25 localization, leading to impaired hormone release.
- Scgn deficiency in mice mimicked impaired hormone release and increased susceptibility to colitis.
Conclusions:
- Functional deficiency in SCGN can lead to intestinal inflammation, specifically ulcerative colitis.
- The neuroendocrine cellular compartment plays a significant role in IBD pathogenesis.
- SCGN is a novel genetic factor implicated in inflammatory bowel disease.
Related Concept Videos
Inflammatory Bowel Disease II: Crohn's Disease
Inflammatory bowel disease, commonly known as IBD, refers to a collection of disorders that lead to persistent inflammation of the gastrointestinal tract. The two types of IBD are ulcerative colitis, which impacts the colon, and Crohn's disease, which can involve any part of the gastrointestinal segment.
Crohn's disease
Crohn's disease is a chronic, systemic inflammatory bowel disease (IBD) that predominantly affects the gastrointestinal tract. It is marked by...
Inflammatory Bowel Disease I: Ulcerative Colitis
Inflammatory bowel disease, or IBD, encompasses a group of disorders characterized by chronic inflammation or ulceration of the gastrointestinal tract.
Risk Factors
The exact cause of IBD remains unclear, although it is believed to be due to a mix of genetic, environmental, microbial, and immune factors. Genetic factors are significant in determining susceptibility to IBD, with family history being a critical risk factor. Individuals with a first-degree relative who has IBD are at...
Chronic Bowel Disorders: Introduction
Irritable Bowel Syndrome (IBS) is a common disorder affecting the gastrointestinal tract. The distinctive feature is recurrent abdominal pain associated with altered bowel movements, manifesting as constipation, diarrhea, or fluctuating between both. The...
Inflammatory Bowel Disease III: Diagnostic Studies and Management I-Nutritional Therapy
Diagnostic studies
A colonoscopy is the definitive screening test, distinguishing ulcerative colitis from other colon diseases with similar symptoms. During a colonoscopy test, inflamed mucosa with exudate ulcerations can be observed, and biopsies are taken to determine the histologic characteristics of the...
Role Of Notch Signalling In Intestinal Stem Cell Renewal
Direct cell-to-cell contact is needed for the activation of Notch signaling. The signal is initiated when a notch ligand binds to a receptor on an adjacent cell, also...
Pleiotropy

