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Analyzing Melts and Fluids from Ab Initio Molecular Dynamics Simulations with the UMD Package
Published on: September 17, 2021
Computation of the equilibrium three-particle entropy for dense atomic fluids by molecular dynamics simulation
Luca Maffioli1, Nathan Clisby1, Federico Frascoli1
1Department of Mathematics, Swinburne University of Technology, P.O. Box 218, Hawthorn, Victoria 3122, Australia.
Abstract:
We have computed the two- and three-particle contribution to the entropy of a Weeks-Chandler-Andersen fluid via molecular dynamics simulations. The three-particle correlation function and entropy were computed with a new method which simplified the calculation. Results are qualitatively similar to Lennard-Jones systems. We observed a numerical instability in the three-particle contribution. This phenomenon has been previously detected when the traditional method is used; thus, it is likely to be intrinsic in the computation. While the effect of statistical fluctuations can be removed through an extrapolation procedure, the discretization error due to the finite bin size is more difficult to characterize. With a correct choice of the bin size, a good estimate of the three-particle entropy contribution can be achieved at any state, even close to the freezing point. We observed that, despite the fact that the magnitude of the three-particle contribution increases significantly compared to that of the two-particle contribution as freezing is approached, the error induced from overestimation of the excess entropy by the two- and three-body terms exceeds that induced by approximating the excess entropy with the two body term alone.
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