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A Reporter Assay to Analyze Intronic microRNA Maturation in Mammalian Cells
Published on: June 16, 2022
The Splicing Factor hnRNP M Is a Critical Regulator of Innate Immune Gene Expression in Macrophages
Kelsi O West1, Haley M Scott1, Sylvia Torres-Odio1
1Department of Microbial Pathogenesis and Immunology, Texas A&M Health Science Center, Bryan, TX 77807, USA.
Abstract:
While transcriptional control of innate immune gene expression is well characterized, almost nothing is known about how pre-mRNA splicing decisions influence, or are influenced by, macrophage activation. Here, we demonstrate that the splicing factor hnRNP M is a critical repressor of innate immune gene expression and that its function is regulated by pathogen sensing cascades. Loss of hnRNP M led to hyperinduction of a unique regulon of inflammatory and antimicrobial genes following diverse innate immune stimuli. While mutating specific serines on hnRNP M had little effect on its ability to control pre-mRNA splicing or transcript levels of housekeeping genes in resting macrophages, it greatly impacted the protein's ability to dampen induction of specific innate immune transcripts following pathogen sensing. These data reveal a previously unappreciated role for pattern recognition receptor signaling in controlling splicing factor phosphorylation and establish pre-mRNA splicing as a critical regulatory node in defining innate immune outcomes.
Insights
The splicing factor hnRNP M represses innate immune genes. Pathogen sensing regulates hnRNP M, controlling gene expression and macrophage activation crucial for immune responses.
Area of Science:
- Immunology
- Molecular Biology
- Gene Regulation
Background:
- Transcriptional control of innate immunity is understood, but the role of pre-mRNA splicing in macrophage activation remains unclear.
- Splicing factors are essential for gene expression, but their specific roles in innate immune responses are largely uncharacterized.
Purpose of the Study:
- To investigate the role of pre-mRNA splicing, specifically the splicing factor hnRNP M, in regulating innate immune gene expression during macrophage activation.
- To determine how pathogen sensing pathways influence the function of splicing factors like hnRNP M.
Main Methods:
- Utilized genetic manipulation to study the function of hnRNP M in macrophages.
- Investigated the impact of hnRNP M loss and specific mutations on gene expression following innate immune stimuli.
- Analyzed the role of pathogen sensing cascades in regulating splicing factor phosphorylation.
Main Results:
- hnRNP M acts as a critical repressor of innate immune gene expression.
- Loss of hnRNP M leads to hyperinduction of inflammatory and antimicrobial genes upon innate immune stimulation.
- Pathogen sensing pathways regulate hnRNP M phosphorylation, impacting its ability to control innate immune gene induction.
Conclusions:
- Pre-mRNA splicing is a critical regulatory mechanism in innate immunity, influenced by pathogen sensing.
- Splicing factor phosphorylation, regulated by pattern recognition receptor signaling, plays a key role in innate immune outcomes.
- hnRNP M is a novel regulator of innate immune gene expression, linking splicing to macrophage activation.
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