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Updated: Jan 4, 2026

Large Scale Non-targeted Metabolomic Profiling of Serum by Ultra Performance Liquid Chromatography-Mass Spectrometry UPLC-MS
Published on: March 14, 2013
Update on metabolism of abemaciclib: In silico, in vitro, and in vivo metabolite identification and characterization
Disha Thakkar1, Abhijeet S Kate1
1National Institute of Pharmaceutical Education and Research-Ahmedabad, Palaj Gandhinagar Gujarat, India.
Abstract:
Abemaciclib was approved by the US Food and Drug Administration in 2015 as an advanced treatment for metastatic breast cancer. Identification and characterization of limited numbers of abemaciclib metabolites have been reported in the literature. Therefore, the current study focused on the investigation of the in vitro and in vivo metabolic fate of abemaciclib using high resolution mass spectrometry. Initially, a vulnerable site of metabolism was predicted by the Xenosite web predictor tool. Later, in vitro metabolites were identified from pooled rat liver microsomes, rat S9 fractions, and human liver microsomes. Finally, in vivo metabolites have been detected in plasma, urine, and feces matrix of male Sprague-Dawley rats. A total of 12 putative metabolites (11 phase I and 1 phase II) of abemaciclib and their metabolic pathways were proposed by considering accurate mass, mass fragmentation pattern, nitrogen rule, and ring double bonds of the detected metabolites. Abemaciclib was metabolized via hydroxylation, N-oxidation, N-dealkylation, oxidative deamination followed by reduction and sulfate conjugation. In the human liver microsomes, maximum numbers of metabolites (11 metabolites) were observed, from which M7, M8, M9, and M11 were human specific.
Insights
This study investigated the metabolic fate of abemaciclib, a breast cancer drug. Researchers identified 12 metabolites, including human-specific ones, through in vitro and in vivo analyses.
Area of Science:
- Pharmacology
- Drug Metabolism
- Mass Spectrometry
Background:
- Abemaciclib is an FDA-approved treatment for metastatic breast cancer.
- Limited information exists on abemaciclib's metabolites.
- Understanding drug metabolism is crucial for efficacy and safety.
Purpose of the Study:
- To investigate the in vitro and in vivo metabolic fate of abemaciclib.
- To identify and characterize abemaciclib metabolites and their pathways.
- To compare metabolism across different species and matrices.
Main Methods:
- Prediction of metabolism sites using Xenosite web predictor.
- Identification of in vitro metabolites using rat liver microsomes, S9 fractions, and human liver microsomes.
- Detection of in vivo metabolites in rat plasma, urine, and feces using high-resolution mass spectrometry.
Main Results:
- A total of 12 putative metabolites (11 phase I, 1 phase II) were identified.
- Metabolism occurred via hydroxylation, N-oxidation, N-dealkylation, oxidative deamination, reduction, and sulfate conjugation.
- Eleven metabolites were found in human liver microsomes, with four (M7, M8, M9, M11) being human-specific.
Conclusions:
- The study elucidated the metabolic pathways of abemaciclib.
- Identified human-specific metabolites provide insights into species differences.
- This research contributes to a better understanding of abemaciclib's pharmacokinetic profile.
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