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Updated: Jan 4, 2026

Visualizing Methane-Cycling Microbial Dynamics in Coastal Wetlands
Published on: January 31, 2025
Where old meets new: An ecosystem study of methanogenesis in a reflooded agricultural peatland
Gavin McNicol1,2, Sara H Knox1, Thomas P Guilderson2,3
1Department of Environmental Science, Policy, and Management, University of California, Berkeley, Berkeley, CA, USA.
Abstract:
Reflooding formerly drained peatlands has been proposed as a means to reduce losses of organic matter and sequester soil carbon for climate change mitigation, but a renewal of high methane emissions has been reported for these ecosystems, offsetting mitigation potential. Our ability to interpret observed methane fluxes in reflooded peatlands and make predictions about future flux trends is limited due to a lack of detailed studies of methanogenic processes. In this study we investigate methanogenesis in a reflooded agricultural peatland in the Sacramento Delta, California. We use the stable-and radio-carbon isotopic signatures of wetland sediment methane, ecosystem-scale eddy covariance flux observations, and laboratory incubation experiments, to identify which carbon sources and methanogenic production pathways fuel methanogenesis and how these processes are affected by vegetation and seasonality. We found that the old peat contribution to annual methane emissions was large (~30%) compared to intact wetlands, indicating a biogeochemical legacy of drainage. However, fresh carbon and the acetoclastic pathway still accounted for the majority of methanogenesis throughout the year. Although temperature sensitivities for bulk peat methanogenesis were similar between open-water (Q10 = 2.1) and vegetated (Q10 = 2.3) soils, methane production from both fresh and old carbon sources showed pronounced seasonality in vegetated zones. We conclude that high methane emissions in restored wetlands constitute a biogeochemical trade-off with contemporary carbon uptake, given that methane efflux is fueled primarily by fresh carbon inputs.
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