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Cancer data classification using binary bat optimization and extreme learning machine with a novel fitness function.

Kaveri Chatra1, Venkatanareshbabu Kuppili2, Damodar Reddy Edla1

  • 1Department of Computer Science and EngineeringNational Institute of Technology Goa, Ponda, India.

Medical & Biological Engineering & Computing
|November 13, 2019
PubMed
Summary
This summary is machine-generated.

This study introduces a new method for cancer classification using gene expression data. It utilizes the binary bat algorithm for feature selection and extreme learning machine for improved accuracy in identifying cancer types.

Keywords:
CancerDNAGene

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Area of Science:

  • Bioinformatics
  • Computational Biology
  • Machine Learning in Medicine

Background:

  • Cancer classification is vital in medicine.
  • High-dimensional gene expression data presents challenges for machine learning models.
  • Effective feature selection is crucial for accurate cancer classification.

Purpose of the Study:

  • To propose a novel methodology for cancer classification using gene expression data.
  • To enhance feature selection for high-dimensional gene expression datasets.
  • To improve the performance of machine learning models in cancer identification.

Main Methods:

  • Utilizing the binary bat algorithm (BBA) for optimized feature selection.
  • Employing the extreme learning machine (ELM) for cancer classification.
  • Developing and applying a novel fitness function to optimize the BBA for feature selection.

Main Results:

  • The proposed methodology, incorporating a novel fitness function for BBA, demonstrates superior performance compared to the original fitness function.
  • The optimized feature selection process significantly enhances cancer classification accuracy.
  • Experimental results validate the effectiveness of the combined BBA and ELM approach.

Conclusions:

  • The proposed bio-inspired feature selection method combined with ELM offers a powerful approach for cancer classification.
  • This methodology effectively addresses the challenges posed by high-dimensional gene expression data.
  • The novel fitness function significantly improves the performance of the binary bat algorithm in this application.