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Automated Segmentation of Cortical Grey Matter from T1-Weighted MRI Images
Published on: January 7, 2019
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Performance of five automated white matter hyperintensity segmentation methods in a multicenter dataset
Rutger Heinen1, Martijn D Steenwijk2,3, Frederik Barkhof3,4
1Department of Neurology and Neurosurgery, UMC Utrecht Brain Center, University Medical Center Utrecht, Utrecht University, Utrecht, The Netherlands. R.Heinen-2@umcutrecht.nl.
Scientific Reports
|November 16, 2019
Summary
Automated white matter hyperintensities (WMH) segmentation methods were evaluated across multiple MRI scanners. The kNN-TTP method demonstrated the best performance for segmenting WMH in multicenter datasets.
Area of Science:
- Neurology
- Medical Imaging
- Artificial Intelligence in Medicine
Background:
- White matter hyperintensities (WMH) are key markers of cerebral small vessel disease.
- Large, pooled multicenter datasets are crucial for studying WMH but challenge automated segmentation.
- Current evaluations of automated WMH segmentation methods lack multicenter validation.
Purpose of the Study:
- To evaluate the performance of five freely available, automated WMH segmentation methods in a multicenter setting.
- To compare the consistency of these methods across different MRI scanners and vendors.
- To provide guidance for selecting appropriate automated WMH segmentation tools for multicenter research.
Main Methods:
- WMH segmentation was performed on 60 patients across six different MRI scanners using five automated methods: Cascade, kNN-TTP, Lesion-TOADS, LST-LGA, and LST-LPA.
- Manual WMH segmentations served as the reference standard.
- Method performance was assessed using Dice's similarity coefficient (DSC) and intra-class correlation coefficient (ICC) for spatial and volumetric accuracy, respectively, both within and across scanners.
Main Results:
- The kNN-TTP method showed the best performance, exhibiting superior spatial and volumetric correspondence with manual segmentations across scanners.
- LST-LPA and LST-LGA also demonstrated good performance, outperforming Lesion-TOADS and Cascade.
- Performance variations were observed across different methods and scanner configurations, highlighting the impact of multicenter data.
Conclusions:
- kNN-TTP is a reliable method for automated WMH segmentation in multicenter studies.
- The study underscores the need for robust evaluation of automated segmentation consistency across diverse MRI environments.
- Findings can inform the selection of WMH segmentation tools, improving the reliability of multicenter neuroimaging research.

