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HERES, a lncRNA that regulates canonical and noncanonical Wnt signaling pathways via interaction with EZH2
Bo-Hyun You1, Jung-Ho Yoon2, Hoin Kang3
1Department of Life Science, College of Natural Sciences, Hanyang University, 04763 Seoul, Republic of Korea.
Abstract:
Wnt signaling through both canonical and noncanonical pathways plays a core role in development. Dysregulation of these pathways often causes cancer development and progression. Although the pathways independently contribute to the core processes, a regulatory molecule that commonly activates both of them has not yet been reported. Here, we describe a long noncoding RNA (lncRNA), HERES, that epigenetically regulates both canonical and noncanonical Wnt signaling pathways in esophageal squamous cell carcinoma (ESCC). For this study, we performed RNA-seq analysis on Korean ESCC patients and validated these results on a larger ESCC cohort to identify lncRNAs commonly dysregulated in ESCCs. Six of the dysregulated lncRNAs were significantly associated with the clinical outcomes of ESCC patients and defined 4 ESCC subclasses with different prognoses. HERES reduction repressed cell proliferation, migration, invasion, and colony formation in ESCC cell lines and tumor growth in xenograft models. HERES appears to be a transacting factor that regulates CACNA2D3, SFRP2, and CXXC4 simultaneously to activate Wnt signaling pathways through an interaction with EZH2 via its G-quadruple structure-like motif. Our results suggest that HERES holds substantial potential as a therapeutic target for ESCC and probably other cancers caused by defects in Wnt signaling pathways.
Insights
A novel long noncoding RNA (lncRNA), HERES, epigenetically regulates both canonical and noncanonical Wnt signaling pathways. This discovery offers a potential therapeutic target for esophageal squamous cell carcinoma (ESCC) and other cancers.
Area of Science:
- Molecular Biology
- Cancer Research
- Epigenetics
Background:
- Wnt signaling pathways are crucial in development and their dysregulation is linked to cancer.
- Canonical and noncanonical Wnt pathways are independently regulated, with no known common activator.
- Esophageal squamous cell carcinoma (ESCC) progression involves complex molecular mechanisms.
Purpose of the Study:
- To identify novel regulatory molecules in ESCC.
- To investigate the role of long noncoding RNAs (lncRNAs) in Wnt signaling.
- To explore HERES as a potential therapeutic target in ESCC.
Main Methods:
- RNA sequencing (RNA-seq) on Korean ESCC patient cohorts.
- Validation of lncRNA dysregulation in a larger ESCC cohort.
- Functional assays including cell proliferation, migration, invasion, colony formation, and xenograft models.
- Investigation of HERES interaction with EZH2 and target genes (CACNA2D3, SFRP2, CXXC4).
Main Results:
- Identified HERES, a lncRNA, that epigenetically regulates both canonical and noncanonical Wnt signaling in ESCC.
- HERES dysregulation was associated with clinical outcomes and defined prognostic subclasses in ESCC.
- HERES reduction inhibited ESCC cell proliferation, migration, invasion, colony formation, and tumor growth.
- HERES acts as a transacting factor, interacting with EZH2 to regulate Wnt pathway genes.
Conclusions:
- HERES is a key regulator of Wnt signaling in ESCC.
- HERES demonstrates significant potential as a therapeutic target for ESCC.
- The findings suggest HERES may also be relevant for other cancers involving Wnt pathway defects.
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