Reductionist synthetic community approaches in root microbiome research
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Updated: Jan 3, 2026

Author Spotlight: Developing Synthetic Microbial Communities for Generating Second-Generation Biofertilizers
Published on: May 24, 2024
Yong-Xin Liu1, Yuan Qin2, Yang Bai2
1State Key Laboratory of Plant Genomics, Institute of Genetics and Developmental Biology, Chinese Academy of Sciences, Beijing 100101, China; CAS Center for Excellence in Biotic Interactions, University of Chinese Academy of Sciences, Beijing 100049, China; CAS-JIC Centre of Excellence for Plant and Microbial Science (CEPAMS), Institute of Genetics and Developmental Biology, Chinese Academy of Sciences (CAS), Beijing 100101, China.
Abstract:
Synthetic community (SynCom) approaches can provide functional and mechanistic insights into how plants regulate their microbiomes, and how the microbiome in turn influences plant growth and health. Microbial cultivation and reconstruction play pivotal roles in this process, which enables researchers to reproducibly investigate the interactions between plants and a major proportion of plant-associated microbes in controlled laboratory conditions. Here, we summarize the emergence, current achievements, and future opportunities for using SynCom experiments in plant microbiome research, with a focus on plant root-associated bacteria.
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