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Updated: Jan 3, 2026

In Silico Identification and Characterization of circRNAs During Host-Pathogen Interactions
Published on: October 21, 2022
Circular RNA CircCCNB1 sponges micro RNA-449a to inhibit cellular senescence by targeting CCNE2
Ai Qing Yu1, Zhi Xiao Wang2, Wu Wu3
1Peking University Research Center on Aging, Department of Biochemistry and Biophysics, School of Basic Medical Sciences, Peking University Health Science Center, Beijing Key Laboratory of Protein Posttranslational Modifications and Cell Function, Beijing 100191, China.
Abstract:
Circular RNAs (CircRNAs) are a novel subset of non-coding RNA widely present in eukaryotes that play a central role in physiological and pathological conditions. Accumulating evidence has indicated that CircRNAs participated in modulating tumorigenesis by acting as a competing endogenous RNA (CeRNA). However, the roles and functions of CircRNAs in cellular senescence and aging of organisms remain largely obscure. We performed whole transcriptome sequencing to compare the expression patterns of circular RNAs in young and prematurely senescent human diploid fibroblast 2BS cells, and identified senescence-associated circRNAs (SAC-RNAs). Among these SAC-RNAs, we observed the significantly downregulated expression of CircRNAs originating from exons 6 and 7 circularization of the cyclin B1 gene (CCNB1), termed CircCCNB1. Reduced CircCCNB1 expression triggered senescence in young 2BS cells, as measured by increased senescence associated-beta-galactosidase (SA-β-gal) activity, enhanced expression of cyclin-dependent kinase inhibitor 1A (CDKN1A)/P21 and tumor protein 53 (TP53) expression, and reduced cell proliferation. Mechanistically, reduced CircCCNB1 level inhibited cyclin E2 (CCNE2) expression by modulating micro RNA (miR)-449a activity, which repressed cellular proliferation. Our data suggested that CircCCNB1may serve as a sponge against miR-449a to delay cellular senescence by targeting CCNE2. Targeting CircCCNB1 may represent a promising strategy for aging and age-related disease interventions. Furthermore, we also identified and characterized several kinds of the CircCCNB1-binding proteins (CBPs), which may contribute to the degradation of CircCCNB1.
Insights
Circular RNAs (CircRNAs) are key in aging. Downregulated CircCCNB1 accelerates cellular senescence by sponging miR-449a, impacting CCNE2 and cell proliferation. Targeting CircCCNB1 may help treat age-related diseases.
Area of Science:
- Molecular Biology
- Genetics
- Gerontology
Background:
- Circular RNAs (CircRNAs) are non-coding RNAs involved in various biological processes.
- Their role in cellular senescence and organismal aging is not well understood.
- CircRNAs can function as competing endogenous RNAs (CeRNAs).
Purpose of the Study:
- To investigate the role of CircRNAs in cellular senescence.
- To identify senescence-associated circRNAs (SAC-RNAs).
- To elucidate the function and mechanism of CircCCNB1 in senescence.
Main Methods:
- Whole transcriptome sequencing of young and senescent human diploid fibroblast 2BS cells.
- Quantitative analysis of CircCCNB1 expression.
- Assessment of senescence markers (SA-β-gal, CDKN1A/P21, TP53).
- Investigation of the miR-449a/CCNE2 axis.
Main Results:
- CircCCNB1 expression was significantly downregulated in senescent cells.
- Reduced CircCCNB1 expression induced premature senescence in young cells.
- CircCCNB1 acts as a sponge for miR-449a, inhibiting CCNE2 and repressing proliferation.
- CircCCNB1-binding proteins (CBPs) involved in its degradation were identified.
Conclusions:
- CircCCNB1 plays a crucial role in delaying cellular senescence.
- The CircCCNB1/miR-449a/CCNE2 pathway is a novel regulator of senescence.
- CircCCNB1 represents a potential therapeutic target for aging and related diseases.
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