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Updated: Jan 2, 2026

High-Throughput Total Internal Reflection Fluorescence and Direct Stochastic Optical Reconstruction Microscopy Using a Photonic Chip
Published on: November 16, 2019
High-Throughput Total Internal Reflection Fluorescence and Direct Stochastic Optical Reconstruction Microscopy Using
David André Coucheron1, Øystein Ivar Helle1, Cristina Ionica Øie2
1Department of Physics and Technology, UiT The Arctic University of Norway.
Chip-based nanoscopy uses optical waveguides for total internal reflection fluorescence (TIRF) imaging, enabling large fields of view. This novel approach offers high-throughput super-resolution microscopy with potential for multi-modal analysis.
Area of Science:
- Optical microscopy
- Super-resolution imaging
- Nanotechnology
Background:
- Total internal reflection fluorescence (TIRF) microscopy enhances contrast in super-resolution imaging via optical sectioning.
- Conventional TIRF microscopy is limited by small fields of view and low throughput due to high numerical aperture objectives for excitation and collection.
Purpose of the Study:
- To introduce and demonstrate chip-based nanoscopy, a novel method for generating TIRF excitation using optical waveguides.
- To showcase the advantages of decoupled excitation and collection pathways for enhanced imaging capabilities.
Main Methods:
- Implementation of chip-based nanoscopy in an existing microscope setup.
- Utilizing optical waveguides for TIRF excitation.
- Imaging liver sinusoidal endothelial cells (LSECs) using direct stochastic optical reconstruction microscopy (dSTORM).
Main Results:
- Achieved large field of view TIRF images using a low magnification lens, decoupling excitation and collection.
- Demonstrated high-throughput imaging of a 500 µm x 500 µm area with 76 nm resolution.
- Obtained resolution comparable to traditional super-resolution microscopes.
Conclusions:
- Chip-based nanoscopy provides a compact, retrofittable solution for high-throughput 2D super-resolution imaging.
- The technique allows for imaging with a large field of view and potential for integration with other on-chip optical techniques for multi-modal analysis.
Related Concept Videos
Super-resolution Fluorescence Microscopy
Total Internal Reflection Fluorescence Microscopy
Confocal Fluorescence Microscopy

