Related Experiment Video
Updated: Jan 2, 2026

Author Spotlight: Exploring the Long-Term Health Impacts of Intracytoplasmic Sperm Injection on Offspring
Published on: May 17, 2024
Microbial contamination in assisted reproductive technology: source, prevalence, and cost
E D Borges1,2, T S Berteli3, T F Reis4
1Department of Obstetrics and Gynecology, Faculty of Medicine of Ribeirão Preto, University of São Paulo, 3900 Bandeirantes Avenue, Ribeirão Preto, SP, 14049-900, Brazil. eduardoborgesd@gmail.com.
Abstract:
Even the strictest laboratories and clinics are prone to the occurrence of microbial contamination. In the case of in vitro fertilization (IVF) research and practice facilities, the number of possible sources is particularly vast. In addition to ambient air, personnel, and non-sterilized materials, follicular fluid and semen from patients are a very common gateway for a diverse range of bacteria and fungi into embryo cultures. Even so, reports of contamination cases are rare, what leads many clinics to see the issue as a negligible risk. Microbiological contamination may result in the demise of the patient's embryos, leading to additional costs to both the patient and the clinics. Regardless of financial loss, emotional costs, and stress levels during IVF are highly distressing. Other worrisome consequences include DNA fragmentation, poor-quality embryos, early pregnancy loss or preterm birth, and possible long-term damages that need further investigation. In this review, we aimed to shed a light on the issue that we consider largely underestimated and to be the underlying cause of poor IVF outcomes in many cases. We also discuss the composition of the microbiome and how its interaction with the reproductive tract of IVF-seeking patients might influence their outcomes. In conclusion, we urge clinics to more rigorously identify, register, and report contamination occurrences, and highlight the role of the study of the microbiome to improve overall results and safety of assisted reproduction.
Insights
Microbial contamination in in vitro fertilization (IVF) is an underestimated cause of poor outcomes. Addressing contamination and studying the microbiome can improve IVF success rates and patient safety.
Area of Science:
- Reproductive Science
- Microbiology
- Clinical Laboratory Science
Background:
- Microbial contamination is a frequent risk in in vitro fertilization (IVF) facilities, originating from diverse sources including air, personnel, materials, and patient samples.
- Despite potential risks, contamination events are often underreported, leading to a perception of negligible risk among clinics.
- Contamination can lead to embryo loss, increased costs, and significant emotional distress for patients undergoing IVF.
Purpose of the Study:
- To highlight the underestimated impact of microbial contamination on IVF outcomes.
- To discuss the role of the microbiome in the reproductive tract and its influence on IVF success.
- To advocate for improved identification, registration, and reporting of contamination incidents in IVF settings.
Main Methods:
- This is a review article, synthesizing existing research on microbial contamination in IVF.
- The review examines the sources and consequences of contamination within IVF laboratories.
- It also explores the composition of the human microbiome and its interaction with reproductive health.
Main Results:
- Microbial contamination is a significant, yet often overlooked, factor contributing to poor IVF results.
- Patient-derived samples like follicular fluid and semen are common vectors for microbial contaminants.
- Potential consequences extend beyond embryo loss to include DNA fragmentation, reduced embryo quality, and adverse pregnancy outcomes.
Conclusions:
- Clinics should implement more rigorous protocols for identifying, registering, and reporting microbial contamination.
- Investigating the microbiome of patients seeking fertility treatment is crucial for improving IVF outcomes.
- Enhanced focus on contamination control and microbiome research can significantly improve the safety and efficacy of assisted reproduction.
Related Concept Videos
Healthcare Associated Infections II: Preventive Measures
The best practices for preventing healthcare-associated infections include hand hygiene, patient risk...
In Vitro Fertilization
The IVF process begins with ovarian stimulation, during which reproductive endocrinologists prescribe hormonal medications to stimulate the ovaries to produce multiple eggs instead of the single...
Real Time RT-PCR
The real-time quantification of the number of amplified products is...
Key Techniques in Microbiology

