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Intramucosal Inoculation of Squamous Cell Carcinoma Cells in Mice for Tumor Immune Profiling and Treatment Response Assessment
Published on: April 22, 2019
MAP2K1 is a potential therapeutic target in erlotinib resistant head and neck squamous cell carcinoma
Ankit P Jain1,2, Krishna Patel1,3, Sneha Pinto1,4
1Institute of Bioinformatics, International Technology Park, Bangalore, 560066, India.
Abstract:
Epidermal growth factor receptor (EGFR) targeted therapies have shown limited efficacy in head and neck squamous cell carcinoma (HNSCC) patients despite its overexpression. Identifying molecular mechanisms associated with acquired resistance to EGFR-TKIs such as erlotinib remains an unmet need and a therapeutic challenge. In this study, we employed an integrated multi-omics approach to delineate mechanisms associated with acquired resistance to erlotinib by carrying out whole exome sequencing, quantitative proteomic and phosphoproteomic profiling. We observed amplification of several genes including AXL kinase and transcription factor YAP1 resulting in protein overexpression. We also observed expression of constitutively active mutant MAP2K1 (p.K57E) in erlotinib resistant SCC-R cells. An integrated analysis of genomic, proteomic and phosphoproteomic data revealed alterations in MAPK pathway and its downstream targets in SCC-R cells. We demonstrate that erlotinib-resistant cells are sensitive to MAPK pathway inhibition. This study revealed multiple genetic, proteomic and phosphoproteomic alterations associated with erlotinib resistant SCC-R cells. Our data indicates that therapeutic targeting of MAPK pathway is an effective strategy for treating erlotinib-resistant HNSCC tumors.
Insights
Acquired resistance to erlotinib in head and neck squamous cell carcinoma (HNSCC) involves genetic changes like AXL and YAP1 amplification. Targeting the MAPK pathway offers a promising therapeutic strategy for resistant HNSCC tumors.
Area of Science:
- Oncology
- Molecular Biology
- Genomics
Background:
- Epidermal growth factor receptor (EGFR) targeted therapies show limited efficacy in head and neck squamous cell carcinoma (HNSCC).
- Acquired resistance to EGFR tyrosine kinase inhibitors (TKIs) like erlotinib is a significant therapeutic challenge in HNSCC.
- Understanding the molecular mechanisms of erlotinib resistance is crucial for developing effective treatment strategies.
Purpose of the Study:
- To investigate the molecular mechanisms underlying acquired resistance to erlotinib in HNSCC.
- To identify genetic and proteomic alterations associated with erlotinib resistance.
- To evaluate the therapeutic potential of targeting identified pathways in resistant HNSCC.
Main Methods:
- Integrated multi-omics approach including whole exome sequencing, quantitative proteomic, and phosphoproteomic profiling.
- Analysis of erlotinib-resistant HNSCC cell lines (SCC-R).
- Genomic, proteomic, and phosphoproteomic data integration to identify key molecular alterations.
Main Results:
- Observed gene amplification of AXL kinase and transcription factor YAP1, leading to protein overexpression in resistant cells.
- Identified constitutively active mutant MAP2K1 (p.K57E) in erlotinib-resistant SCC-R cells.
- Revealed alterations in the MAPK pathway and its downstream targets through integrated multi-omics analysis.
Conclusions:
- Multiple genetic, proteomic, and phosphoproteomic alterations contribute to erlotinib resistance in HNSCC.
- Erlotinib-resistant HNSCC cells remain sensitive to MAPK pathway inhibition.
- Targeting the MAPK pathway represents a viable therapeutic strategy for erlotinib-resistant HNSCC.
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