p53-induced ARVCF modulates the splicing landscape and supports the tumor suppressive function of p53

Natsumi Suzuki1, Masashi Idogawa2,3, Shoichiro Tange1

  • 1Department of Medical Genome Sciences, Research Institute for Frontier Medicine, Sapporo Medical University School of Medicine, Sapporo, Japan.

Oncogene
|December 13, 2019
PubMed

Insights

The tumor suppressor p53 directly targets the ARVCF gene, which is crucial for p53-induced apoptosis. ARVCF influences gene splicing, contributing to p53

Area of Science:

  • Molecular Biology
  • Cancer Biology
  • Genetics

Background:

  • The p53 tumor suppressor gene plays a critical role in cancer prevention.
  • Understanding p53 target genes is essential for deciphering its tumor-suppressive functions.

Purpose of the Study:

  • To identify direct p53 target genes.
  • To investigate the role of ARVCF in p53-mediated cellular processes.
  • To explore the connection between ARVCF, splicing, and cancer.

Main Methods:

  • ChIP-sequencing to identify p53 binding sites.
  • mRNA and protein expression analysis.
  • RNA interference (RNAi) for gene knockdown.
  • Analysis of alternative splicing patterns.

Main Results:

  • ARVCF was identified as a direct p53 target gene, with p53 binding to two sites within the ARVCF locus.
  • p53 activation led to increased ARVCF expression at both mRNA and protein levels.
  • ARVCF knockdown inhibited p53-induced apoptosis.
  • ARVCF interacts with hnRNPH2, a splicing factor, and its knockdown altered alternative splicing patterns.
  • p53-induced ARVCF indirectly regulates p53 target selectivity via splicing alterations.

Conclusions:

  • ARVCF induction contributes to the tumor suppressive function of p53.
  • ARVCF's role in alternative splicing in cancer suggests potential as a diagnostic and therapeutic target.

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