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Updated: Jan 1, 2026

Implementation of In Vitro Drug Resistance Assays: Maximizing the Potential for Uncovering Clinically Relevant Resistance Mechanisms
Published on: December 9, 2015
Endocrine therapy resistance: new insights
Jonathan T Lei1, Meenakshi Anurag2, Svasti Haricharan3
1Lester and Sue Smith Breast Center, Baylor College of Medicine, Houston, TX 77030, USA.
Abstract:
The estrogen receptor positive (ER+) subset is the dominant contributor to global deaths from breast cancer which now exceeds 500,000 deaths annually. Lethality is driven by endocrine resistance, which has been shown to be associated with high mutational rates and extreme subclonal diversity. Treatment forces subclonal selection until the patient eventually succumbs to metastatic treatment-resistant disease. Recently, we have been addressing several questions related to this process: What is the cause of the increased mutation rate in lethal ER+ breast cancer? Why is endocrine therapy resistance related to mutational load? What are the functions of the somatic mutations that are eventually selected in the treatment resistant and metastatic clones? These questions have provoked new mechanistic hypotheses that link resistance to endocrine agents to: (1) Specific defects in single strand break repair are associated with increased mortality from ER+ breast cancer [1,2]; (2) Loss/mutations of certain single strand break repair proteins that disrupt estrogen-regulated cell cycle control through the ATM, CHK2, CDK4 axis [1,2] thereby directly coupling endocrine therapy resistance to specific DNA repair defects; (3) Acquired mutations that drive metastasis include the generation of in-frame ESR1 gene fusions that activate epithelial-to-mesenchymal transition (EMT) driven metastasis as well as endocrine drug-resistant proliferation [3].
Insights
Estrogen receptor-positive breast cancer deaths are linked to DNA repair defects and acquired mutations. These genetic changes drive endocrine resistance, leading to metastatic disease and treatment failure.
Area of Science:
- Oncology
- Genetics
- Molecular Biology
Background:
- Estrogen receptor-positive (ER+) breast cancer causes over 500,000 global deaths annually, primarily due to endocrine resistance.
- Endocrine resistance is characterized by high mutation rates and significant subclonal diversity, leading to treatment failure and metastasis.
- Understanding the mechanisms driving resistance and metastasis is critical for improving patient outcomes.
Purpose of the Study:
- To investigate the causes of increased mutation rates in lethal ER+ breast cancer.
- To elucidate the relationship between endocrine therapy resistance and mutational load.
- To identify the functions of somatic mutations selected in treatment-resistant and metastatic clones.
Main Methods:
- Analysis of DNA repair defects, specifically single-strand break repair pathways.
- Investigation of mutations in key cell cycle regulators (ATM, CHK2, CDK4 axis).
- Identification of acquired mutations, including ESR1 gene fusions, driving metastasis and resistance.
Main Results:
- Specific defects in single-strand break repair are associated with increased ER+ breast cancer mortality.
- Loss or mutations of single-strand break repair proteins disrupt estrogen-regulated cell cycle control, directly linking DNA repair defects to endocrine resistance.
- Acquired mutations, such as in-frame ESR1 gene fusions, promote epithelial-to-mesenchymal transition (EMT)-driven metastasis and endocrine drug-resistant proliferation.
Conclusions:
- Defects in DNA repair pathways and acquired mutations, including ESR1 fusions, are key drivers of lethal endocrine-resistant ER+ breast cancer.
- These genetic alterations facilitate both resistance to endocrine therapy and the development of metastatic disease.
- Targeting DNA repair mechanisms and understanding mutation-driven resistance pathways may offer new therapeutic strategies for ER+ breast cancer.
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