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Identification of Cyclin-dependent Kinase 1 Specific Phosphorylation Sites by an In Vitro Kinase Assay
Published on: May 3, 2018
Analysis of EYA3 Phosphorylation by Src Kinase Identifies Residues Involved in Cell Proliferation
Aura E Ionescu1, Mihaela Mentel1, Cristian V A Munteanu2
1Department of Enzymology, Institute of Biochemistry of the Romanian Academy, Splaiul Independentei 296, 060031 Bucharest, Romania.
Abstract:
Eyes absent (EYA) are non-thiol-based protein tyrosine phosphatases (PTPs) that also have transcriptional co-activator functions. Their PTP activity is involved in various pathologies. Recently, we demonstrated that Src tyrosine kinase phosphorylates human EYA3 by controlling its subcellular localization. We also found EYA3's ability to autodephosphorylate, while raising the question if the two opposing processes could be involved in maintaining a physiologically adequate level of phosphorylation. Using native and bottom-up mass spectrometry, we performed detailed mapping and characterization of human EYA3 Src-phosphorylation sites. Thirteen tyrosine residues with different phosphorylation and autodephosphorylation kinetics were detected. Among these, Y77, 96, 237, and 508 displayed an increased resistance to autodephosphorylation. Y77 and Y96 were found to have the highest impact on the overall EYA3 phosphorylation. Using cell cycle analysis, we showed that Y77, Y96, and Y237 are involved in HEK293T proliferation. Mutation of the three tyrosine residues abolished the pro-proliferative effect of EYA3 overexpression. We have also identified a Src-induced phosphorylation pattern of EYA3 in these cells. These findings suggest that EYA3's tyrosine phosphorylation sites are non-equivalent with their phosphorylation levels being under the control of Src-kinase activity and of EYA3's autodephosphorylation.
Insights
Eyes absent homolog 3 (EYA3) protein phosphorylation by Src kinase and autodephosphorylation regulates cell proliferation. Specific tyrosine sites on EYA3 impact its function and are critical for HEK293T cell growth.
Area of Science:
- Molecular Biology
- Cell Biology
- Biochemistry
Background:
- Eyes absent (EYA) proteins are non-thiol tyrosine phosphatases with transcriptional co-activator roles.
- EYA protein tyrosine phosphatase (PTP) activity is implicated in various pathologies.
- Src tyrosine kinase regulates human EYA3 localization, and EYA3 possesses autodephosphorylation activity.
Purpose of the Study:
- To map and characterize Src-mediated phosphorylation sites on human EYA3.
- To investigate the interplay between Src phosphorylation and EYA3 autodephosphorylation.
- To determine the role of specific EYA3 phosphorylation sites in cell proliferation.
Main Methods:
- Native and bottom-up mass spectrometry for phosphosite mapping.
- Site-directed mutagenesis to alter tyrosine residues.
- Cell cycle analysis to assess proliferation effects.
Main Results:
- Thirteen tyrosine residues on EYA3 were identified with varying phosphorylation and autodephosphorylation kinetics.
- Tyrosine residues Y77, Y96, Y237, and Y508 showed resistance to autodephosphorylation.
- Y77 and Y96 significantly influenced overall EYA3 phosphorylation.
- Mutations in Y77, Y96, and Y237 abolished EYA3's pro-proliferative effect on HEK293T cells.
- A Src-induced phosphorylation pattern for EYA3 was identified.
Conclusions:
- EYA3 tyrosine phosphorylation sites are non-equivalent and differentially regulated.
- Phosphorylation levels of EYA3 are controlled by both Src kinase activity and EYA3's intrinsic autodephosphorylation.
- Specific EYA3 phosphorylation sites (Y77, Y96, Y237) are crucial for regulating HEK293T cell proliferation.
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