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Mapping the Structure-Function Relationships of Disordered Oncogenic Transcription Factors Using Transcriptomic Analysis
Published on: June 27, 2020
DACT2 modulated by TFAP2A-mediated allelic transcription promotes EGFR-TKIs efficiency in advanced lung
Nasha Zhang1, Yankang Li2, Mengyu Xie2
1Cheeloo College of Medicine, Shandong University, Jinan, Shandong Province, China; Shandong Provincial Key Laboratory of Radiation Oncology, Cancer Research Center, Shandong Cancer Hospital and Institute, Shandong First Medical University and Shandong Academy of Medical Sciences, Jinan, Shandong Province, China; Department of Radiation Oncology, Shandong Cancer Hospital and Institute, Shandong First Medical University and Shandong Academy of Medical Sciences, Jinan, Shandong Province, China.
Abstract:
Patients with epidermal growth factor receptor (EGFR)-mutant advanced non-small-cell lung cancer (NSCLC) benefits from EGFR-tyrosine kinase inhibitor (TKI) treatment. However, drug resistance to EGFR-TKIs remains a great challenge. Single nucleotide polymorphisms (SNPs) may significantly influence prognosis of EGFR-TKI therapy. Herein, we hypothesized that the functional SNP in DACT2, coding a pivotal inhibitor of the Wnt/β-catenin signaling, may affect gene expression, which in turn, impact prognosis of NSCLC treated with EGFR-TKIs. Genotypes of the DACT2 promoter rs9364433 SNP were determined in two independent cohorts consisted of 319 EGFR-TKI treated stage IIIB/IV NSCLC patients. The allele-specific regulation on DACT2 expression by rs9364433 and impacts of DACT2 on gefitinib sensitivity was evaluated in vitro and in vivo. Cox regression analyses demonstrated that rs9364433 was significantly associated with patient survival in both cohorts (all P < 0.05). Reporter gene assays and Electrophoretic Mobility Shift Assays demonstrated that rs9364433 has an allele-specific effect on gene expression modulated by transcription factor TFAP2A. The G allele associated with diminished TFAP2A binding leads to significantly decreased DACT2 expression in NSCLC cell lines and tissues. Consistently, DACT2 could evidently increase the anti-proliferation effect of gefitinib on NSCLC cells. Our findings elucidated potential clinical implications of DACT2, which may result in better understanding and outcome assessment of EGFR-TKI treatments.
Insights
A specific gene variant (rs9364433) in DACT2 influences gene expression and gefitinib sensitivity in non-small cell lung cancer (NSCLC) patients, impacting treatment outcomes.
Area of Science:
- Genetics
- Oncology
- Molecular Biology
Background:
- Epidermal growth factor receptor (EGFR)-mutant advanced non-small-cell lung cancer (NSCLC) patients benefit from EGFR-tyrosine kinase inhibitor (TKI) therapy.
- Drug resistance to EGFR-TKIs presents a significant clinical challenge.
- Single nucleotide polymorphisms (SNPs) may influence the prognosis of EGFR-TKI therapy.
Purpose of the Study:
- To investigate the functional SNP (rs9364433) in DACT2, a Wnt/β-catenin signaling inhibitor, and its impact on gene expression and prognosis in EGFR-TKI treated NSCLC patients.
- To evaluate the allele-specific regulation of DACT2 expression by rs9364433 and its effect on gefitinib sensitivity.
Main Methods:
- Genotyping of the DACT2 promoter rs9364433 SNP in two independent cohorts of 319 EGFR-TKI treated stage IIIB/IV NSCLC patients.
- In vitro and in vivo evaluation of allele-specific DACT2 expression regulation and gefitinib sensitivity.
- Reporter gene assays and Electrophoretic Mobility Shift Assays to determine the mechanism of SNP action.
Main Results:
- Cox regression analyses revealed a significant association between rs9364433 and patient survival in both cohorts (P < 0.05).
- The rs9364433 SNP demonstrated allele-specific effects on DACT2 expression, modulated by transcription factor TFAP2A.
- The G allele of rs9364433 resulted in decreased DACT2 expression and enhanced gefitinib sensitivity in NSCLC cells.
Conclusions:
- The DACT2 rs9364433 SNP significantly impacts gene expression and gefitinib sensitivity in NSCLC.
- This SNP may serve as a predictive biomarker for EGFR-TKI treatment outcomes.
- Understanding the role of DACT2 and its genetic variations can improve treatment strategies and outcome assessment for NSCLC patients.
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