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Updated: Jan 1, 2026

Quantifying Yersinia pseudotuberculosis Type III Secretion System Activity Following Iron Starvation and Anaerobic Growth
Published on: May 31, 2024
Iron availability and oxygen tension regulate the Yersinia Ysc type III secretion system to enable disseminated
Diana Hooker-Romero1, Erin Mettert2, Leah Schwiesow3
1Department of Microbiology and Environmental Toxicology, University of California Santa Cruz, Santa Cruz, CA United States of America.
Abstract:
The enteropathogen Yersinia pseudotuberculosis and the related plague agent Y. pestis require the Ysc type III secretion system (T3SS) to subvert phagocyte defense mechanisms and cause disease. Yet type III secretion (T3S) in Yersinia induces growth arrest and innate immune recognition, necessitating tight regulation of the T3SS. Here we show that Y. pseudotuberculosis T3SS expression is kept low under anaerobic, iron-rich conditions, such as those found in the intestinal lumen where the Yersinia T3SS is not required for growth. In contrast, the Yersinia T3SS is expressed under aerobic or anaerobic, iron-poor conditions, such as those encountered by Yersinia once they cross the epithelial barrier and encounter phagocytic cells. We further show that the [2Fe-2S] containing transcription factor, IscR, mediates this oxygen and iron regulation of the T3SS by controlling transcription of the T3SS master regulator LcrF. IscR binds directly to the lcrF promoter and, importantly, a mutation that prevents this binding leads to decreased disseminated infection of Y. pseudotuberculosis but does not perturb intestinal colonization. Similar to E. coli, Y. pseudotuberculosis uses the Fe-S cluster occupancy of IscR as a readout of oxygen and iron conditions that impact cellular Fe-S cluster homeostasis. We propose that Y. pseudotuberculosis has coopted this system to sense entry into deeper tissues and induce T3S where it is required for virulence. The IscR binding site in the lcrF promoter is completely conserved between Y. pseudotuberculosis and Y. pestis. Deletion of iscR in Y. pestis leads to drastic disruption of T3S, suggesting that IscR control of the T3SS evolved before Y. pestis split from Y. pseudotuberculosis.
Insights
Yersinia bacteria regulate their virulence systems based on iron and oxygen levels. The transcription factor IscR controls the type III secretion system (T3SS), crucial for Yersinia infection.
Area of Science:
- Microbiology
- Bacterial Pathogenesis
- Molecular Biology
Background:
- Yersinia species utilize the Ysc type III secretion system (T3SS) for virulence, but its expression is tightly regulated.
- T3SS expression can trigger host innate immune responses and bacterial growth arrest, necessitating precise control.
Purpose of the Study:
- To investigate the regulatory mechanisms controlling Yersinia T3SS expression in response to environmental cues.
- To identify the role of the transcription factor IscR in mediating iron and oxygen sensing for T3SS regulation.
Main Methods:
- Analysis of Yersinia pseudotuberculosis T3SS expression under varying oxygen and iron conditions.
- Investigation of IscR binding to the lcrF promoter using genetic and biochemical approaches.
- Assessment of bacterial virulence in vivo following genetic manipulation of IscR.
Main Results:
- Yersinia T3SS expression is low in iron-rich, anaerobic conditions (intestinal lumen) and high in aerobic or iron-poor conditions.
- The [2Fe-2S] containing transcription factor IscR directly binds the lcrF promoter, regulating T3SS master regulator LcrF.
- Disruption of IscR binding to lcrF decreased Y. pseudotuberculosis systemic infection but not intestinal colonization.
- IscR functions similarly to E. coli in sensing iron and oxygen via Fe-S cluster homeostasis.
- IscR binding site conservation and iscR deletion effects in Y. pestis suggest ancient regulation of T3SS.
Conclusions:
- Yersinia pseudotuberculosis coopts the IscR iron-sulfur cluster homeostasis system to sense environmental cues and induce T3SS for virulence.
- IscR-mediated regulation of the T3SS is conserved between Y. pseudotuberculosis and Y. pestis, indicating its evolutionary importance.
- Targeting IscR regulation of T3SS presents a potential strategy for combating Yersinia infections.
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