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Construction of a mitochondrial-associated protein DRP1 and a lung cancer-associated protein Erbb4 combined
Junting Liang1, Hongjie Gao1, Wenwen Jin2
1Clinical Bioinformatics Experimental Center, Henan Provincial People's Hospital, People's Hospital of Zhengzhou University, Zhengzhou, Henan 450003, China.
Objective:
This research was to establish a mitochondrial-related Drp1 gene and a lung cancer-related Erbb4 gene to participate in the regulatory network of lung cancer cell apoptosis, and to provide theoretical support for mitochondria to participate in tumor regulation.
Method:
The GO and KEGG methods were used to construct the regulatory networks of lung cancer related Drp1 and Erbb4 proteins that involved in the apoptosis of tumor cells, and to combine with the Bayesian network theory to screen out the largest possible action path acting on this network; The information about Drp1 in Oncomine database was collected, and the data in current database were analyzed twice. The role of Drp1 in lung cancer was meta-analyzed.
Result:
A regulatory network of Drp1 and Erbb4 involved in the apoptosis of tumor cells was successfully constructed; the optimal pathway was optimized using Bayesian theory; a total of 446 different types of research results were collected in the Oncomine database, of which there were 18 studies with statistical differences in Drp1 expression, 13 studies with increased Drp1's expression, and 5 studies with decreased expression. Compared with the control group, Drp1 was expressed in lung cancer tissues highly (P < 0.05).
Conclusion:
Establishment and optimization of mitochondrial-related Drp1 and tumor-related Erbb4 genes involved in the regulation of apoptosis of cancer cells. It was proposed that Drp1 was expressed in lung cancer tissues highly through in-depth excavation of tumor-associated gene information in the Oncomine gene chip database.
Insights
Mitochondrial Dynamin 1-like protein (Drp1) and Erb-B2 receptor tyrosine kinase 4 (Erbb4) genes are involved in lung cancer cell apoptosis. Drp1 is highly expressed in lung cancer tissues, suggesting its role in tumor regulation.
Area of Science:
- Molecular Biology
- Oncology
- Bioinformatics
Background:
- Mitochondria play a crucial role in cellular apoptosis.
- Dysregulation of apoptosis is a hallmark of cancer, including lung cancer.
- Understanding the molecular mechanisms of lung cancer cell apoptosis is vital for developing targeted therapies.
Purpose of the Study:
- To establish the roles of the mitochondrial-related Dynamin 1-like protein (Drp1) gene and the lung cancer-related Erb-B2 receptor tyrosine kinase 4 (Erbb4) gene in the regulatory network of lung cancer cell apoptosis.
- To provide theoretical support for the involvement of mitochondria in tumor regulation.
Main Methods:
- Gene Ontology (GO) and Kyoto Encyclopedia of Genes and Genomes (KEGG) methods were used to construct regulatory networks for Drp1 and Erbb4 in lung cancer cell apoptosis.
- Bayesian network theory was applied to identify the optimal action pathway within the constructed network.
- Meta-analysis of Drp1 expression data from the Oncomine database was performed to assess its role in lung cancer.
Main Results:
- A regulatory network involving Drp1 and Erbb4 in tumor cell apoptosis was successfully constructed and optimized using Bayesian theory.
- Analysis of the Oncomine database revealed 18 studies with statistically significant differences in Drp1 expression in lung cancer.
- Drp1 was found to be highly expressed in lung cancer tissues compared to control groups (P < 0.05).
Conclusions:
- The study successfully established and optimized the regulatory network of mitochondrial Drp1 and tumor-associated Erbb4 genes in cancer cell apoptosis.
- High expression of Drp1 in lung cancer tissues was confirmed through meta-analysis of gene chip data.
- These findings support the involvement of Drp1 and mitochondria in the regulation of lung cancer progression.
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