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A data management workflow of biodiversity data from the field to data users
Rachel A Hackett1,2, Michael W Belitz1,3, Edward E Gilbert4
1Department of Biology Institute for Great Lakes Research Central Michigan University Bioscience Building 2100, 1455 Calumet Court Mount Pleasant Michigan 48859 USA.
Standardized biodiversity data workflows improve data accessibility and reuse. This study details a successful workflow for collecting, sharing, and using diverse ecological data, enhancing scientific collaboration and data longevity.
Area of Science:
- Ecology
- Biodiversity Science
- Data Management
Background:
- Biodiversity data exhibit heterogeneity across scientific communities, hindering findability, accessibility, interoperability, and reusability.
- Effective data workflows are crucial for generating reliable information across institutional and administrative boundaries.
Purpose of the Study:
- To present a case study of a data workflow for collecting, sharing, and utilizing biodiversity data from multiple sources.
- To address challenges in biodiversity data management and promote better data practices.
Main Methods:
- Initiated biodiversity data collection in 2012 focusing on Michigan prairie fens, including plant communities and the Poweshiek skipperling (Oarisma poweshiek).
- Compiled over 23,000 occurrence records adhering to Darwin Core standards, integrating media and various measurements.
- Published data via Global Biodiversity Information Facility (GBIF) and Symbiota SEINet portals.
Main Results:
- Successfully compiled and standardized a large dataset of over 23,000 occurrence records.
- Integrated diverse data types including occurrence, media, biological, chemical, and geometric measurements.
- Disseminated data through established biodiversity information platforms.
Conclusions:
- Optimized data collection using controlled vocabularies, Darwin Core terms, and data dictionaries to improve transcription efficiency.
- Ensured data validity and longevity through voucher specimens, comprehensive metadata, and published methodological details.
- Emphasized the importance of inter-partner cooperation, dynamic tools, flexible templates, and enhanced communication for data interoperability.
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