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Delay differential equation-based models of cardiac tissue: Efficient implementation and effects on spiral-wave
Johnny Moreira Gomes1, Marcelo Lobosco1, Rodrigo Weber Dos Santos1
1Department of Computer Science, Federal University of Juiz de Fora, Juiz de Fora, MG 36036-330, Brazil.
Delay differential equations (DDEs) can model complex cardiac dynamics, but require significant memory. New numerical methods reduce DDE memory usage by 95%, enabling analysis of spiral wave breakup in cardiac tissue.
Area of Science:
- Computational Biology
- Cardiac Electrophysiology
- Mathematical Modeling
Background:
- Delay differential equations (DDEs) are increasingly used to model cardiac electrophysiology, capturing complex dynamics like alternans, instabilities, and chaos.
- These models are crucial for understanding cellular and tissue-level mechanisms underlying cardiac arrhythmias.
- However, DDEs introduce significant computational challenges, particularly memory demands for storing variable histories in simulations.
Purpose of the Study:
- To develop novel numerical methods for solving DDEs in cardiac tissue simulations, reducing memory requirements.
- To analyze the impact of DDEs on spiral wave dynamics and wave propagation in two-dimensional cardiac tissue.
- To investigate how incorporating delays in gating variables affects cardiac tissue behavior.
Main Methods:
- Developed new numerical techniques to optimize history size dynamically based on action potential time scales, mitigating memory usage in DDE simulations.
- Implemented these optimized methods to simulate wave propagation in 2D cardiac tissue models incorporating DDEs.
- Utilized a canine myocyte model to study spiral wave dynamics under DDE influence.
Main Results:
- The proposed methods reduced memory usage by up to 95% in cardiac tissue simulations compared to standard algorithms.
- For the first time, DDEs were analyzed for their effects on spiral wave dynamics in 2D cardiac tissue.
- Introducing delays in calcium current gating variables using DDEs was shown to induce spiral wave breakup.
Conclusions:
- Optimized numerical methods significantly improve the computational efficiency of DDE-based cardiac electrophysiology models.
- DDEs, particularly when modeling delays in ionic currents, can be a key factor in inducing complex dynamics like spiral wave breakup in cardiac tissue.
- These findings advance the understanding of cardiac arrhythmias and computational approaches for their simulation.
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