Machine and deep learning approaches for cancer drug repurposing

Naiem T Issa1, Vasileios Stathias2, Stephan Schürer2

  • 1Dr. Phillip Frost Department of Dermatology and Cutaneous Surgery, University of Miami School of Medicine, Miami, FL, USA.

Insights

Advancements in "omics" and AI accelerate cancer research, but drug development lags. This review explores computational methods for drug repurposing in oncology, aiming to overcome therapeutic limitations.

Area of Science:

  • Oncology
  • Computational Biology
  • Pharmacology

Background:

  • Recent exponential growth in understanding cancer initiation, progression, and metastasis.
  • Limitations in current anti-cancer therapeutics necessitate novel strategies.
  • High cost and time associated with developing new anti-cancer drugs drive interest in drug repurposing.

Purpose of the Study:

  • To review computational and machine learning methods for identifying drug repurposing opportunities in oncology.
  • To discuss the application of these methods in understanding cancer biology and immunomodulation.
  • To highlight strategies for overcoming challenges in oncologic drug repurposing.

Main Methods:

  • Utilizing advanced 'omics' data (genomics, proteomics, etc.).
  • Applying machine learning and artificial intelligence (deep learning) for biological process modeling.
  • In-silico computational strategies for target and drug-phenotype association discovery.

Main Results:

  • Machine and deep learning methods have significantly advanced the identification of novel drug targets and associations.
  • Computational approaches aid in modeling complex cancer biology and identifying pharmacologically relevant pathways.
  • These methods facilitate the discovery of new uses for existing and investigational drugs.

Conclusions:

  • Computational strategies, particularly AI and deep learning, are crucial for accelerating drug repurposing in oncology.
  • Integrating 'omics' data with advanced computational models can uncover new therapeutic avenues.
  • Drug repurposing holds significant promise for cost-effective and efficient expansion of the anti-cancer therapeutic armamentarium.