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Enhancer RNAs in cancer: regulation, mechanisms and therapeutic potential
Joo-Hyung Lee1, Feng Xiong1, Wenbo Li1,2
1Department of Biochemistry and Molecular Biology, McGovern Medical School, University of Texas Health Science Center , Houston, TX, USA.
Abstract:
Enhancers are distal genomic elements critical for gene regulation and cell identify control during development and diseases. Many human cancers were found to associate with enhancer malfunction, due to genetic and epigenetic alterations, which in some cases directly drive tumour growth. Conventionally, enhancers are known to provide DNA binding motifs to recruit transcription factors (TFs) and to control target genes. However, recent progress found that most, if not all, active enhancers pervasively transcribe noncoding RNAs that are referred to as enhancer RNAs (eRNAs). Increasing evidence points to functional roles of at least a subset of eRNAs in gene regulation in both normal and cancer cells, adding new insights into the action mechanisms of enhancers. eRNA expression was observed to be widespread but also specific to tumour types and individual patients, serving as opportunities to exploit them as potential diagnosis markers or therapeutic targets. In this review, we discuss the brief history of eRNA research, their functional mechanisms and importance in cancer gene regulation, as well as their therapeutic and diagnostic values in cancer. We propose that further studies of eRNAs in cancer will offer a promising 'eRNA targeted therapy' for human cancer intervention.
Insights
Enhancer RNAs (eRNAs) are noncoding RNAs transcribed from enhancers, playing crucial roles in gene regulation. Research highlights their potential as diagnostic markers and therapeutic targets for various human cancers.
Area of Science:
- Genomics and Molecular Biology
- Cancer Research
- Gene Regulation
Background:
- Enhancers are critical distal genomic elements regulating gene expression and cell identity.
- Enhancer malfunction, due to genetic/epigenetic alterations, is linked to human cancer development.
- Active enhancers are now known to produce noncoding RNAs, termed enhancer RNAs (eRNAs).
Purpose of the Study:
- To review the history, functional mechanisms, and importance of eRNAs in cancer gene regulation.
- To explore the therapeutic and diagnostic potential of eRNAs in oncology.
- To propose eRNA-targeted therapy as a promising intervention for human cancers.
Main Methods:
- Literature review of eRNA research in the context of cancer gene regulation.
- Analysis of evidence supporting functional roles of eRNAs in normal and cancer cells.
- Discussion of eRNA expression patterns and their implications for diagnostics and therapeutics.
Main Results:
- Most active enhancers pervasively transcribe eRNAs, which have functional roles in gene regulation.
- eRNA expression is widespread yet specific to tumor types and individual patients.
- A subset of eRNAs demonstrates significant roles in cancer gene regulation.
Conclusions:
- eRNAs represent a novel class of molecules with significant implications in cancer biology.
- The tumor-specific expression of eRNAs offers opportunities for developing diagnostic markers.
- Targeting eRNAs presents a promising strategy for novel cancer therapies.
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