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Updated: Dec 31, 2025

Assays for Validating Histone Acetyltransferase Inhibitors
Published on: August 6, 2020
Histone deacetylase inhibitors dysregulate DNA repair proteins and antagonize metastasis-associated processes
Nicole Kiweler1,2, Désirée Wünsch3, Matthias Wirth4,5
1Department of Toxicology, University Medical Center of the Johannes Gutenberg University Mainz, Obere Zahlbacher Straße 67, 55131, Mainz, Germany.
Purpose:
We set out to determine whether clinically tested epigenetic drugs against class I histone deacetylases (HDACs) affect hallmarks of the metastatic process.
Methods:
We treated permanent and primary renal, lung, and breast cancer cells with the class I histone deacetylase inhibitors (HDACi) entinostat (MS-275) and valproic acid (VPA), the replicative stress inducer hydroxyurea (HU), the DNA-damaging agent cis-platinum (L-OHP), and the cytokine transforming growth factor-β (TGFβ). We used proteomics, quantitative PCR, immunoblot, single cell DNA damage assays, and flow cytometry to analyze cell fate after drug exposure.
Results:
We show that HDACi interfere with DNA repair protein expression and trigger DNA damage and apoptosis alone and in combination with established chemotherapeutics. Furthermore, HDACi disrupt the balance of cell adhesion protein expression and abrogate TGFβ-induced cellular plasticity of transformed cells.
Conclusion:
HDACi suppress the epithelial-mesenchymal transition (EMT) and compromise the DNA integrity of cancer cells. These data encourage further testing of HDACi against tumor cells.
Insights
Epigenetic drugs targeting histone deacetylases (HDACs) inhibit cancer cell DNA repair and plasticity, suppressing metastasis. These HDAC inhibitors show promise for further cancer therapy development.
Area of Science:
- Oncology
- Epigenetics
- Molecular Biology
Background:
- Metastasis is a complex process involving cellular plasticity and DNA integrity.
- Histone deacetylases (HDACs) play a role in cancer progression.
- Epigenetic drugs targeting HDACs are under clinical investigation.
Purpose of the Study:
- To investigate the effect of class I histone deacetylase inhibitors (HDACi) on the hallmarks of cancer metastasis.
- To determine if clinically tested epigenetic drugs impact key metastatic processes.
Main Methods:
- Treatment of renal, lung, and breast cancer cells with HDAC inhibitors (entinostat, VPA), hydroxyurea, cis-platinum, and TGF-β.
- Analysis of cellular response using proteomics, qPCR, immunoblot, DNA damage assays, and flow cytometry.
Main Results:
- HDAC inhibitors interfere with DNA repair protein expression, inducing DNA damage and apoptosis.
- HDAC inhibitors disrupt cell adhesion protein balance and abrogate TGF-β-induced cellular plasticity.
- HDAC inhibitors suppress epithelial-mesenchymal transition (EMT) and compromise cancer cell DNA integrity.
Conclusions:
- Class I HDAC inhibitors suppress key metastatic processes, including EMT and cellular plasticity.
- HDAC inhibitors compromise cancer cell DNA integrity, leading to apoptosis.
- These findings support further clinical evaluation of HDAC inhibitors in cancer treatment.
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