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Variable selection and estimation in causal inference using Bayesian spike and slab priors.

Brandon Koch1, David M Vock2, Julian Wolfson2

  • 1School of Community Health Sciences, University of Nevada, Reno, USA.

Statistical Methods in Medical Research
|January 16, 2020
PubMed
Summary
This summary is machine-generated.

Estimating causal effects from observational data is challenging. The novel bilevel spike and slab causal estimator (BSSCE) improves accuracy by considering both outcome and treatment models, especially with many covariates.

Keywords:
Bayesian methodscausal inferencehigh-dimensional dataspike and slabvariable selection

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Area of Science:

  • Biostatistics
  • Causal Inference
  • Observational Data Analysis

Background:

  • Accurate causal effect estimation from observational data requires adjusting for confounding variables.
  • Standard methods may fail to identify all relevant confounders, impacting unbiased estimation.
  • Covariate selection often prioritizes outcome prediction over treatment association.

Purpose of the Study:

  • To introduce a novel bilevel spike and slab causal estimator (BSSCE) for unbiased causal effect estimation.
  • To develop a Bayesian approach that simultaneously models outcome and treatment assignment.
  • To improve upon existing methods by minimizing the mean squared error of treatment effect estimation.

Main Methods:

  • Utilizing a Bayesian framework with spike and slab priors on covariate coefficients.
  • Simultaneously fitting models for both the outcome and treatment assignment.
  • Deriving theoretical properties of the treatment effect estimator to justify the chosen priors.

Main Results:

  • BSSCE demonstrated substantial reduction in mean squared error compared to existing methods.
  • The method performs robustly, particularly with a high number of covariates, even exceeding sample size.
  • Causal effect of vasoactive therapy versus fluid resuscitation on hypotensive episode length was estimated.

Conclusions:

  • BSSCE offers a reliable and straightforward method for causal inference from observational data.
  • The bilevel approach effectively addresses confounding by considering both outcome and treatment models.
  • This method shows significant promise for complex datasets, including critical care data.