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Updated: Dec 30, 2025

Multiscale Sampling of a Heterogeneous Water/Metal Catalyst Interface using Density Functional Theory and Force-Field Molecular Dynamics
Published on: April 12, 2019
Quantum mechanical/molecular mechanical trajectory surface hopping molecular dynamics simulation by spin-flip
Noriyuki Minezawa1, Takahito Nakajima1
1Computational Molecular Science Research Team, RIKEN Center for Computational Science, 7-1-26 Minatojima-minamimachi, Chuo-ku, Kobe, Hyogo 650-0047, Japan.
This study introduces a new simulation method combining spin-flip time-dependent density functional theory (SF-TDDFT) with hybrid quantum/molecular mechanics (QM/MM) for solution-phase nonadiabatic dynamics. The approach accurately models excited-state transitions in aqueous systems.
Area of Science:
- Computational Chemistry
- Theoretical Chemistry
- Physical Chemistry
Background:
- Nonadiabatic molecular dynamics simulations are crucial for understanding photochemical processes.
- Accurate modeling of excited-state dynamics in solution remains a computational challenge.
- Existing methods often struggle with describing conical intersections and transitions between electronic states.
Purpose of the Study:
- To extend spin-flip time-dependent density functional theory (SF-TDDFT) for solution-phase nonadiabatic dynamics.
- To develop a hybrid quantum mechanical/molecular mechanics (QM/MM) approach incorporating SF-TDDFT.
- To investigate the photoisomerization of E-azomethane and a green fluorescent protein chromophore in water.
Main Methods:
- Implementation of SF-TDDFT within a QM/MM framework for trajectory surface hopping simulations.
- Modification of computational code to handle electrostatic interactions between QM and MM regions.
- Extraction of classical molecular mechanics (MM) energies and forces from external program packages.
Main Results:
- The developed SF-TDDFT-QM/MM method successfully models the S0/S1 crossing points and S1 → S0 nonadiabatic transitions.
- Simulations of aqueous E-azomethane photoisomerization show good agreement with previous multireference studies.
- The method provides accurate dynamics for the anionic green fluorescent protein chromophore in aqueous solution.
Conclusions:
- SF-TDDFT, even at a single-reference level, can accurately describe nonadiabatic dynamics in condensed phases.
- The QM/MM extension of SF-TDDFT offers a computationally feasible approach for solution-phase photochemical reactions.
- This method provides a valuable tool for studying complex excited-state processes in biologically and chemically relevant environments.
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